Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps54Q5SPW0 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps54Q5SPW0 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps54Q5SPW0 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps54Q5SPW0 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps54Q5SPW0 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.84□□□□□ -0.19
Vps54Q5SPW0 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vps54Q5SPW0 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps54Q5SPW0 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Vps54Q5SPW0 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC13.83□□□□□ -0.19
Vps54Q5SPW0 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Vps54Q5SPW0 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Vps54Q5SPW0 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Vps54Q5SPW0 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Vps54Q5SPW0 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Vps54Q5SPW0 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps54Q5SPW0 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps54Q5SPW0 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Vps54Q5SPW0 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Vps54Q5SPW0 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
Vps54Q5SPW0 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Vps54Q5SPW0 Gm25148-201ENSMUST00000104611 123 ntBASIC13.83□□□□□ -0.2
Vps54Q5SPW0 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Vps54Q5SPW0 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps54Q5SPW0 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC13.83□□□□□ -0.2
Vps54Q5SPW0 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps54Q5SPW0 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC13.83□□□□□ -0.2
Vps54Q5SPW0 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Vps54Q5SPW0 Gm3508-201ENSMUST00000186012 792 ntBASIC13.83□□□□□ -0.2
Vps54Q5SPW0 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC13.83□□□□□ -0.2
Vps54Q5SPW0 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC13.83□□□□□ -0.2
Vps54Q5SPW0 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC13.83□□□□□ -0.2
Vps54Q5SPW0 Gm6430-201ENSMUST00000054664 1248 ntBASIC13.83□□□□□ -0.2
Vps54Q5SPW0 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps54Q5SPW0 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Vps54Q5SPW0 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.83□□□□□ -0.2
Vps54Q5SPW0 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Vps54Q5SPW0 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Vps54Q5SPW0 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps54Q5SPW0 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Vps54Q5SPW0 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps54Q5SPW0 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps54Q5SPW0 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps54Q5SPW0 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps54Q5SPW0 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps54Q5SPW0 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps54Q5SPW0 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Vps54Q5SPW0 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps54Q5SPW0 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps54Q5SPW0 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps54Q5SPW0 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps54Q5SPW0 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps54Q5SPW0 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps54Q5SPW0 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Vps54Q5SPW0 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps54Q5SPW0 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps54Q5SPW0 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps54Q5SPW0 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC13.82□□□□□ -0.2
Vps54Q5SPW0 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC13.82□□□□□ -0.2
Vps54Q5SPW0 Gm3329-201ENSMUST00000159873 556 ntBASIC13.82□□□□□ -0.2
Vps54Q5SPW0 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps54Q5SPW0 Gm29164-201ENSMUST00000185454 1024 ntBASIC13.82□□□□□ -0.2
Vps54Q5SPW0 Gm3551-201ENSMUST00000190750 664 ntBASIC13.82□□□□□ -0.2
Vps54Q5SPW0 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC13.82□□□□□ -0.2
Vps54Q5SPW0 Gm5542-201ENSMUST00000195485 1089 ntBASIC13.82□□□□□ -0.2
Vps54Q5SPW0 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC13.82□□□□□ -0.2
Vps54Q5SPW0 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps54Q5SPW0 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Vps54Q5SPW0 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps54Q5SPW0 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC13.82□□□□□ -0.2
Vps54Q5SPW0 Gm5451-201ENSMUST00000080545 579 ntBASIC13.82□□□□□ -0.2
Vps54Q5SPW0 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.82□□□□□ -0.2
Vps54Q5SPW0 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps54Q5SPW0 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps54Q5SPW0 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps54Q5SPW0 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps54Q5SPW0 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC13.82□□□□□ -0.2
Vps54Q5SPW0 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps54Q5SPW0 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps54Q5SPW0 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC13.82□□□□□ -0.2
Vps54Q5SPW0 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps54Q5SPW0 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps54Q5SPW0 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps54Q5SPW0 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps54Q5SPW0 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps54Q5SPW0 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps54Q5SPW0 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps54Q5SPW0 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps54Q5SPW0 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps54Q5SPW0 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps54Q5SPW0 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps54Q5SPW0 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps54Q5SPW0 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Vps54Q5SPW0 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.81□□□□□ -0.2
Vps54Q5SPW0 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps54Q5SPW0 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps54Q5SPW0 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps54Q5SPW0 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Vps54Q5SPW0 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Vps54Q5SPW0 Gm14460-201ENSMUST00000121511 639 ntBASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms