Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm35715-201ENSMUST00000197421 2054 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Trav3-3Q5R1C3 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Trav3-3Q5R1C3 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trav3-3Q5R1C3 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trav3-3Q5R1C3 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Trav3-3Q5R1C3 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Trav3-3Q5R1C3 Atp2b2-202ENSMUST00000101044 4586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trav3-3Q5R1C3 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trav3-3Q5R1C3 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC8.65□□□□□ -1.02
Trav3-3Q5R1C3 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC8.65□□□□□ -1.02
Trav3-3Q5R1C3 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Trav3-3Q5R1C3 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Trav3-3Q5R1C3 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC8.65□□□□□ -1.02
Trav3-3Q5R1C3 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC8.65□□□□□ -1.02
Trav3-3Q5R1C3 AC134254.1-201ENSMUST00000221362 167 ntBASIC8.65□□□□□ -1.02
Trav3-3Q5R1C3 Cdk7-205ENSMUST00000225990 1159 ntBASIC8.65□□□□□ -1.02
Trav3-3Q5R1C3 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trav3-3Q5R1C3 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Trav3-3Q5R1C3 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC8.65□□□□□ -1.02
Trav3-3Q5R1C3 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC8.65□□□□□ -1.02
Trav3-3Q5R1C3 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trav3-3Q5R1C3 Bcl2l11-201ENSMUST00000019281 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trav3-3Q5R1C3 P2ry14-206ENSMUST00000197841 2476 ntTSL 5 BASIC8.65□□□□□ -1.02
Trav3-3Q5R1C3 Gm38910-201ENSMUST00000204630 2448 ntBASIC8.65□□□□□ -1.02
Trav3-3Q5R1C3 Mapkap1-203ENSMUST00000113126 3018 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trav3-3Q5R1C3 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trav3-3Q5R1C3 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Trav3-3Q5R1C3 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Trav3-3Q5R1C3 Sfi1-202ENSMUST00000081318 3969 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Trav3-3Q5R1C3 Smarcc2-201ENSMUST00000026433 4533 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.03
Trav3-3Q5R1C3 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Trav3-3Q5R1C3 Cd247-206ENSMUST00000161971 2713 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Trav3-3Q5R1C3 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Trav3-3Q5R1C3 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Trav3-3Q5R1C3 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Ctnnd1-202ENSMUST00000066177 5044 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Retreg1-206ENSMUST00000228306 1430 ntBASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Zfp775-203ENSMUST00000204095 4143 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Gm11426-201ENSMUST00000125600 2220 ntTSL 2 BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Fcamr-201ENSMUST00000027670 1743 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Gm22121-201ENSMUST00000175148 54 ntBASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Uba52-ps-201ENSMUST00000183770 379 ntBASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Gm37042-201ENSMUST00000193816 581 ntBASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Gm4768-201ENSMUST00000206199 686 ntBASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 AC150560.1-201ENSMUST00000227731 1187 ntBASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Bpifb9a-201ENSMUST00000088924 2065 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Rasal1-205ENSMUST00000156722 3251 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Birc6-202ENSMUST00000180037 15768 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Gm37003-201ENSMUST00000194702 2827 ntBASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Zfp944-201ENSMUST00000115535 2784 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Gramd1b-202ENSMUST00000118159 2781 ntTSL 5 BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Lpin3-201ENSMUST00000040872 3458 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Fam161b-202ENSMUST00000065536 3000 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms