Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Upf3bQ3ULL6 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upf3bQ3ULL6 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.36□□□□□ -0.43
Upf3bQ3ULL6 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.36□□□□□ -0.43
Upf3bQ3ULL6 Lect2-202ENSMUST00000225183 823 ntBASIC12.36□□□□□ -0.43
Upf3bQ3ULL6 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upf3bQ3ULL6 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upf3bQ3ULL6 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upf3bQ3ULL6 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upf3bQ3ULL6 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upf3bQ3ULL6 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upf3bQ3ULL6 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upf3bQ3ULL6 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upf3bQ3ULL6 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Upf3bQ3ULL6 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.36□□□□□ -0.43
Upf3bQ3ULL6 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upf3bQ3ULL6 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upf3bQ3ULL6 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upf3bQ3ULL6 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upf3bQ3ULL6 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.36□□□□□ -0.43
Upf3bQ3ULL6 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upf3bQ3ULL6 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Upf3bQ3ULL6 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upf3bQ3ULL6 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upf3bQ3ULL6 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Upf3bQ3ULL6 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upf3bQ3ULL6 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 Gm13045-201ENSMUST00000119019 712 ntBASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 Gm26461-201ENSMUST00000175064 290 ntBASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 Gm9555-201ENSMUST00000200908 583 ntBASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3bQ3ULL6 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upf3bQ3ULL6 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upf3bQ3ULL6 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upf3bQ3ULL6 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.34□□□□□ -0.43
Upf3bQ3ULL6 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upf3bQ3ULL6 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Upf3bQ3ULL6 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upf3bQ3ULL6 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Upf3bQ3ULL6 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upf3bQ3ULL6 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upf3bQ3ULL6 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Upf3bQ3ULL6 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.34□□□□□ -0.43
Upf3bQ3ULL6 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upf3bQ3ULL6 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.34□□□□□ -0.43
Upf3bQ3ULL6 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.34□□□□□ -0.43
Upf3bQ3ULL6 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.34□□□□□ -0.43
Upf3bQ3ULL6 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.34□□□□□ -0.43
Upf3bQ3ULL6 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upf3bQ3ULL6 Mir5132-201ENSMUST00000175166 71 ntBASIC12.34□□□□□ -0.43
Upf3bQ3ULL6 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.34□□□□□ -0.43
Upf3bQ3ULL6 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.34□□□□□ -0.43
Upf3bQ3ULL6 Gm12407-201ENSMUST00000180219 324 ntBASIC12.34□□□□□ -0.43
Upf3bQ3ULL6 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.34□□□□□ -0.43
Upf3bQ3ULL6 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.34□□□□□ -0.43
Upf3bQ3ULL6 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.34□□□□□ -0.43
Upf3bQ3ULL6 Gm43378-201ENSMUST00000199336 582 ntBASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms