Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Gm5308-201ENSMUST00000196752 1354 ntBASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Defa-ps4-201ENSMUST00000118021 183 ntBASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col19a1Q0VF58 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Gm4705-201ENSMUST00000177415 354 ntBASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Gm6216-201ENSMUST00000182390 687 ntBASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Gm26957-201ENSMUST00000182645 977 ntBASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Gm5254-201ENSMUST00000188353 977 ntBASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col19a1Q0VF58 AC134601.2-201ENSMUST00000221071 130 ntBASIC12.3□□□□□ -0.44
Col19a1Q0VF58 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col19a1Q0VF58 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col19a1Q0VF58 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col19a1Q0VF58 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col19a1Q0VF58 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.29□□□□□ -0.44
Col19a1Q0VF58 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col19a1Q0VF58 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col19a1Q0VF58 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col19a1Q0VF58 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Col19a1Q0VF58 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Col19a1Q0VF58 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Col19a1Q0VF58 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col19a1Q0VF58 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC12.29□□□□□ -0.44
Col19a1Q0VF58 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col19a1Q0VF58 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col19a1Q0VF58 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.29□□□□□ -0.44
Col19a1Q0VF58 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col19a1Q0VF58 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Col19a1Q0VF58 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.29□□□□□ -0.44
Col19a1Q0VF58 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col19a1Q0VF58 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Col19a1Q0VF58 Gm24933-201ENSMUST00000103762 110 ntBASIC12.29□□□□□ -0.44
Col19a1Q0VF58 Gm23252-201ENSMUST00000103776 110 ntBASIC12.29□□□□□ -0.44
Col19a1Q0VF58 Gm14071-201ENSMUST00000117817 509 ntBASIC12.29□□□□□ -0.44
Col19a1Q0VF58 Gm14740-201ENSMUST00000118538 1150 ntBASIC12.29□□□□□ -0.44
Col19a1Q0VF58 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC12.29□□□□□ -0.44
Col19a1Q0VF58 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col19a1Q0VF58 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC12.29□□□□□ -0.44
Col19a1Q0VF58 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Col19a1Q0VF58 Gm26443-201ENSMUST00000179610 110 ntBASIC12.29□□□□□ -0.44
Col19a1Q0VF58 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Col19a1Q0VF58 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col19a1Q0VF58 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col19a1Q0VF58 Gm29543-201ENSMUST00000188138 967 ntBASIC12.29□□□□□ -0.44
Col19a1Q0VF58 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Col19a1Q0VF58 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC12.29□□□□□ -0.44
Col19a1Q0VF58 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC12.29□□□□□ -0.44
Col19a1Q0VF58 AC154347.2-201ENSMUST00000221223 715 ntTSL 3 BASIC12.29□□□□□ -0.44
Col19a1Q0VF58 AC154407.1-201ENSMUST00000226777 526 ntBASIC12.29□□□□□ -0.44
Col19a1Q0VF58 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col19a1Q0VF58 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col19a1Q0VF58 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Col19a1Q0VF58 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col19a1Q0VF58 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col19a1Q0VF58 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Col19a1Q0VF58 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Col19a1Q0VF58 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col19a1Q0VF58 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col19a1Q0VF58 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Col19a1Q0VF58 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC12.29□□□□□ -0.44
Col19a1Q0VF58 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col19a1Q0VF58 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col19a1Q0VF58 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms