Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Cd24a-202ENSMUST00000214476 743 ntAPPRIS ALT2 TSL 3 BASIC10.3□□□□□ -0.76
Chd8Q09XV5 AC122459.4-201ENSMUST00000228654 551 ntBASIC10.3□□□□□ -0.76
Chd8Q09XV5 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Chd8Q09XV5 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
Chd8Q09XV5 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC10.3□□□□□ -0.76
Chd8Q09XV5 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Chd8Q09XV5 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Chd8Q09XV5 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Chd8Q09XV5 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Chd8Q09XV5 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Chd8Q09XV5 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Chd8Q09XV5 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Chd8Q09XV5 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Chd8Q09XV5 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Chd8Q09XV5 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Chd8Q09XV5 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Chd8Q09XV5 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Chd8Q09XV5 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Chd8Q09XV5 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC10.3□□□□□ -0.76
Chd8Q09XV5 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Chd8Q09XV5 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Chd8Q09XV5 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Chd8Q09XV5 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Chd8Q09XV5 Gm12247-201ENSMUST00000117585 670 ntBASIC10.29□□□□□ -0.76
Chd8Q09XV5 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC10.29□□□□□ -0.76
Chd8Q09XV5 Gm23497-201ENSMUST00000157738 130 ntBASIC10.29□□□□□ -0.76
Chd8Q09XV5 Gm6098-201ENSMUST00000180234 330 ntBASIC10.29□□□□□ -0.76
Chd8Q09XV5 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC10.29□□□□□ -0.76
Chd8Q09XV5 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Chd8Q09XV5 Gm9353-201ENSMUST00000200472 604 ntBASIC10.29□□□□□ -0.76
Chd8Q09XV5 Gm44159-201ENSMUST00000204065 442 ntBASIC10.29□□□□□ -0.76
Chd8Q09XV5 Gm39348-201ENSMUST00000216861 640 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Chd8Q09XV5 Gm10015-201ENSMUST00000072570 465 ntBASIC10.29□□□□□ -0.76
Chd8Q09XV5 Eif2b3-201ENSMUST00000070610 1369 ntTSL 5 BASIC10.29□□□□□ -0.76
Chd8Q09XV5 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Chd8Q09XV5 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Chd8Q09XV5 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Chd8Q09XV5 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Chd8Q09XV5 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Chd8Q09XV5 Gm33466-201ENSMUST00000199819 1689 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Chd8Q09XV5 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Chd8Q09XV5 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Chd8Q09XV5 Serpina5-201ENSMUST00000021495 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Chd8Q09XV5 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Chd8Q09XV5 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Chd8Q09XV5 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Chd8Q09XV5 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.29□□□□□ -0.76
Chd8Q09XV5 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Chd8Q09XV5 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Chd8Q09XV5 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Chd8Q09XV5 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Chd8Q09XV5 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Chd8Q09XV5 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Chd8Q09XV5 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Chd8Q09XV5 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Chd8Q09XV5 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Chd8Q09XV5 Gm8302-201ENSMUST00000119217 852 ntBASIC10.29□□□□□ -0.76
Chd8Q09XV5 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC10.29□□□□□ -0.76
Chd8Q09XV5 Mok-204ENSMUST00000177224 551 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Chd8Q09XV5 Gm21083-201ENSMUST00000188807 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Chd8Q09XV5 Gm21149-201ENSMUST00000197995 1212 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Chd8Q09XV5 Gm45893-201ENSMUST00000211899 247 ntBASIC10.29□□□□□ -0.76
Chd8Q09XV5 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Chd8Q09XV5 Ryk-ps1-201ENSMUST00000219713 235 ntBASIC10.29□□□□□ -0.76
Chd8Q09XV5 Gm34237-201ENSMUST00000220575 1257 ntTSL 5 BASIC10.29□□□□□ -0.76
Chd8Q09XV5 Gm5668-201ENSMUST00000220897 436 ntBASIC10.29□□□□□ -0.76
Chd8Q09XV5 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC10.29□□□□□ -0.76
Chd8Q09XV5 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Chd8Q09XV5 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.29□□□□□ -0.76
Chd8Q09XV5 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Chd8Q09XV5 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Chd8Q09XV5 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC10.29□□□□□ -0.76
Chd8Q09XV5 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.29□□□□□ -0.76
Chd8Q09XV5 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Chd8Q09XV5 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Chd8Q09XV5 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Chd8Q09XV5 H2-DMb2-202ENSMUST00000171231 1483 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Chd8Q09XV5 Gm16439-201ENSMUST00000100687 564 ntBASIC10.28□□□□□ -0.76
Chd8Q09XV5 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Chd8Q09XV5 Gm12254-201ENSMUST00000134617 471 ntBASIC10.28□□□□□ -0.76
Chd8Q09XV5 Tead1-211ENSMUST00000170352 1218 ntTSL 5 BASIC10.28□□□□□ -0.76
Chd8Q09XV5 1700095A13Rik-201ENSMUST00000185460 711 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Chd8Q09XV5 Gm3116-201ENSMUST00000189440 1116 ntBASIC10.28□□□□□ -0.76
Chd8Q09XV5 Gm37858-201ENSMUST00000192759 1231 ntBASIC10.28□□□□□ -0.76
Chd8Q09XV5 Gm30301-201ENSMUST00000199474 652 ntTSL 5 BASIC10.28□□□□□ -0.76
Chd8Q09XV5 AC102327.1-201ENSMUST00000226389 742 ntBASIC10.28□□□□□ -0.76
Chd8Q09XV5 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Chd8Q09XV5 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.28□□□□□ -0.76
Chd8Q09XV5 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Chd8Q09XV5 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC10.28□□□□□ -0.76
Chd8Q09XV5 Gm9415-201ENSMUST00000200462 1321 ntBASIC10.28□□□□□ -0.76
Chd8Q09XV5 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
Chd8Q09XV5 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Chd8Q09XV5 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Chd8Q09XV5 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Chd8Q09XV5 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Chd8Q09XV5 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Chd8Q09XV5 AC151836.1-201ENSMUST00000228730 1637 ntBASIC10.28□□□□□ -0.76
Chd8Q09XV5 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Chd8Q09XV5 Gm13543-201ENSMUST00000121230 796 ntBASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms