Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc4Q08624 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc4Q08624 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Hoxc4Q08624 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.1□□□□□ -0.63
Hoxc4Q08624 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Hoxc4Q08624 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc4Q08624 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc4Q08624 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc4Q08624 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc4Q08624 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Hoxc4Q08624 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc4Q08624 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc4Q08624 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc4Q08624 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Hoxc4Q08624 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc4Q08624 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc4Q08624 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc4Q08624 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc4Q08624 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Hoxc4Q08624 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc4Q08624 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Hoxc4Q08624 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc4Q08624 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc4Q08624 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc4Q08624 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc4Q08624 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc4Q08624 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Hoxc4Q08624 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC11.09□□□□□ -0.63
Hoxc4Q08624 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc4Q08624 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC11.09□□□□□ -0.63
Hoxc4Q08624 Gm29410-201ENSMUST00000188383 694 ntBASIC11.09□□□□□ -0.63
Hoxc4Q08624 Gm33366-201ENSMUST00000195583 3827 ntBASIC11.09□□□□□ -0.63
Hoxc4Q08624 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc4Q08624 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC11.09□□□□□ -0.63
Hoxc4Q08624 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Hoxc4Q08624 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Hoxc4Q08624 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.09□□□□□ -0.63
Hoxc4Q08624 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.09□□□□□ -0.63
Hoxc4Q08624 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Hoxc4Q08624 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc4Q08624 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc4Q08624 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc4Q08624 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.09□□□□□ -0.63
Hoxc4Q08624 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc4Q08624 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc4Q08624 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc4Q08624 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Hoxc4Q08624 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc4Q08624 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc4Q08624 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc4Q08624 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc4Q08624 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc4Q08624 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.09□□□□□ -0.63
Hoxc4Q08624 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Hoxc4Q08624 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Hoxc4Q08624 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc4Q08624 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc4Q08624 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.08□□□□□ -0.64
Hoxc4Q08624 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc4Q08624 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.08□□□□□ -0.64
Hoxc4Q08624 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Hoxc4Q08624 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.08□□□□□ -0.64
Hoxc4Q08624 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc4Q08624 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Hoxc4Q08624 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc4Q08624 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc4Q08624 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Hoxc4Q08624 Gm25063-201ENSMUST00000104666 94 ntBASIC11.08□□□□□ -0.64
Hoxc4Q08624 Gm15617-201ENSMUST00000118973 771 ntBASIC11.08□□□□□ -0.64
Hoxc4Q08624 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc4Q08624 Gm13117-201ENSMUST00000120894 691 ntBASIC11.08□□□□□ -0.64
Hoxc4Q08624 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC11.08□□□□□ -0.64
Hoxc4Q08624 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC11.08□□□□□ -0.64
Hoxc4Q08624 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.08□□□□□ -0.64
Hoxc4Q08624 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC11.08□□□□□ -0.64
Hoxc4Q08624 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc4Q08624 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Hoxc4Q08624 Gm19246-201ENSMUST00000173599 255 ntBASIC11.08□□□□□ -0.64
Hoxc4Q08624 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc4Q08624 Gm4895-201ENSMUST00000181646 1137 ntBASIC11.08□□□□□ -0.64
Hoxc4Q08624 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc4Q08624 Gm30946-201ENSMUST00000198288 724 ntBASIC11.08□□□□□ -0.64
Hoxc4Q08624 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC11.08□□□□□ -0.64
Hoxc4Q08624 Gm4811-201ENSMUST00000220879 1220 ntBASIC11.08□□□□□ -0.64
Hoxc4Q08624 AC153152.3-201ENSMUST00000222188 1135 ntBASIC11.08□□□□□ -0.64
Hoxc4Q08624 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC11.08□□□□□ -0.64
Hoxc4Q08624 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Hoxc4Q08624 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc4Q08624 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.08□□□□□ -0.64
Hoxc4Q08624 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Hoxc4Q08624 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.08□□□□□ -0.64
Hoxc4Q08624 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Hoxc4Q08624 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Hoxc4Q08624 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC11.08□□□□□ -0.64
Hoxc4Q08624 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc4Q08624 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.08□□□□□ -0.64
Hoxc4Q08624 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc4Q08624 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc4Q08624 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc4Q08624 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms