Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tff1Q08423 Gm36987-201ENSMUST00000194704 2979 ntBASIC9.6□□□□□ -0.87
Tff1Q08423 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tff1Q08423 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tff1Q08423 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tff1Q08423 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tff1Q08423 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Tff1Q08423 Gm45496-201ENSMUST00000209918 2917 ntBASIC9.6□□□□□ -0.87
Tff1Q08423 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Tff1Q08423 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Tff1Q08423 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tff1Q08423 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Tff1Q08423 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC9.6□□□□□ -0.87
Tff1Q08423 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tff1Q08423 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC9.6□□□□□ -0.87
Tff1Q08423 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tff1Q08423 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tff1Q08423 Gm5847-201ENSMUST00000178959 1595 ntBASIC9.6□□□□□ -0.87
Tff1Q08423 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Tff1Q08423 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC9.6□□□□□ -0.87
Tff1Q08423 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Tff1Q08423 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Tff1Q08423 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Tff1Q08423 Gm13296-201ENSMUST00000117854 997 ntBASIC9.6□□□□□ -0.87
Tff1Q08423 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tff1Q08423 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Tff1Q08423 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Tff1Q08423 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC9.6□□□□□ -0.87
Tff1Q08423 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC9.6□□□□□ -0.87
Tff1Q08423 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Tff1Q08423 Gm27438-201ENSMUST00000183480 110 ntBASIC9.6□□□□□ -0.87
Tff1Q08423 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Tff1Q08423 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC9.6□□□□□ -0.87
Tff1Q08423 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC9.6□□□□□ -0.87
Tff1Q08423 AC153954.1-201ENSMUST00000216959 255 ntBASIC9.6□□□□□ -0.87
Tff1Q08423 Gm18730-201ENSMUST00000218038 343 ntBASIC9.6□□□□□ -0.87
Tff1Q08423 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC9.6□□□□□ -0.87
Tff1Q08423 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tff1Q08423 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tff1Q08423 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC9.6□□□□□ -0.87
Tff1Q08423 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC9.6□□□□□ -0.87
Tff1Q08423 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Tff1Q08423 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Tff1Q08423 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tff1Q08423 AC122811.1-201ENSMUST00000222257 2921 ntBASIC9.6□□□□□ -0.87
Tff1Q08423 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tff1Q08423 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Tff1Q08423 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tff1Q08423 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC9.6□□□□□ -0.87
Tff1Q08423 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tff1Q08423 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Tff1Q08423 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tff1Q08423 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Tff1Q08423 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tff1Q08423 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC9.6□□□□□ -0.87
Tff1Q08423 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tff1Q08423 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC9.6□□□□□ -0.87
Tff1Q08423 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tff1Q08423 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tff1Q08423 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC9.59□□□□□ -0.87
Tff1Q08423 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tff1Q08423 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tff1Q08423 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Tff1Q08423 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tff1Q08423 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tff1Q08423 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Tff1Q08423 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Tff1Q08423 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Tff1Q08423 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Tff1Q08423 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Tff1Q08423 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tff1Q08423 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC9.59□□□□□ -0.87
Tff1Q08423 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tff1Q08423 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC9.59□□□□□ -0.87
Tff1Q08423 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Tff1Q08423 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Tff1Q08423 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tff1Q08423 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Tff1Q08423 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
Tff1Q08423 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tff1Q08423 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Tff1Q08423 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC9.59□□□□□ -0.87
Tff1Q08423 Gm13996-201ENSMUST00000118456 430 ntBASIC9.59□□□□□ -0.87
Tff1Q08423 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC9.59□□□□□ -0.87
Tff1Q08423 Gm14665-201ENSMUST00000122294 557 ntBASIC9.59□□□□□ -0.87
Tff1Q08423 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC9.59□□□□□ -0.87
Tff1Q08423 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Tff1Q08423 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC9.59□□□□□ -0.87
Tff1Q08423 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Tff1Q08423 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC9.59□□□□□ -0.87
Tff1Q08423 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Tff1Q08423 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Tff1Q08423 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Tff1Q08423 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Tff1Q08423 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC9.59□□□□□ -0.87
Tff1Q08423 Gm45433-201ENSMUST00000209386 247 ntBASIC9.59□□□□□ -0.87
Tff1Q08423 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC9.59□□□□□ -0.87
Tff1Q08423 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tff1Q08423 Gzmn-202ENSMUST00000225535 989 ntBASIC9.59□□□□□ -0.87
Tff1Q08423 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms