Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GabpaQ00422 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
GabpaQ00422 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GabpaQ00422 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
GabpaQ00422 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
GabpaQ00422 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
GabpaQ00422 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GabpaQ00422 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
GabpaQ00422 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GabpaQ00422 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.07□□□□□ -0.32
GabpaQ00422 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GabpaQ00422 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GabpaQ00422 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GabpaQ00422 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
GabpaQ00422 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GabpaQ00422 Gm26684-202ENSMUST00000228229 8257 ntBASIC13.07□□□□□ -0.32
GabpaQ00422 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
GabpaQ00422 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
GabpaQ00422 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
GabpaQ00422 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
GabpaQ00422 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
GabpaQ00422 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
GabpaQ00422 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
GabpaQ00422 AC165351.1-201ENSMUST00000219078 2020 ntBASIC13.07□□□□□ -0.32
GabpaQ00422 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GabpaQ00422 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
GabpaQ00422 Gm12791-201ENSMUST00000120788 655 ntBASIC13.07□□□□□ -0.32
GabpaQ00422 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC13.07□□□□□ -0.32
GabpaQ00422 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC13.07□□□□□ -0.32
GabpaQ00422 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC13.07□□□□□ -0.32
GabpaQ00422 AC153152.3-201ENSMUST00000222188 1135 ntBASIC13.07□□□□□ -0.32
GabpaQ00422 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GabpaQ00422 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
GabpaQ00422 Gm16380-201ENSMUST00000077997 478 ntBASIC13.07□□□□□ -0.32
GabpaQ00422 n-R5s185-201ENSMUST00000083953 119 ntBASIC13.07□□□□□ -0.32
GabpaQ00422 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
GabpaQ00422 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GabpaQ00422 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
GabpaQ00422 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC13.07□□□□□ -0.32
GabpaQ00422 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
GabpaQ00422 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
GabpaQ00422 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GabpaQ00422 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC13.07□□□□□ -0.32
GabpaQ00422 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GabpaQ00422 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
GabpaQ00422 Gm18294-201ENSMUST00000176980 1748 ntBASIC13.07□□□□□ -0.32
GabpaQ00422 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC13.07□□□□□ -0.32
GabpaQ00422 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
GabpaQ00422 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
GabpaQ00422 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
GabpaQ00422 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GabpaQ00422 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GabpaQ00422 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GabpaQ00422 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GabpaQ00422 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
GabpaQ00422 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GabpaQ00422 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GabpaQ00422 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.07□□□□□ -0.32
GabpaQ00422 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GabpaQ00422 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
GabpaQ00422 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
GabpaQ00422 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
GabpaQ00422 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
GabpaQ00422 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GabpaQ00422 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
GabpaQ00422 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC13.06□□□□□ -0.32
GabpaQ00422 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
GabpaQ00422 Gm5740-201ENSMUST00000211003 1857 ntBASIC13.06□□□□□ -0.32
GabpaQ00422 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
GabpaQ00422 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GabpaQ00422 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
GabpaQ00422 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GabpaQ00422 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
GabpaQ00422 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GabpaQ00422 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
GabpaQ00422 Gm12218-201ENSMUST00000117666 399 ntBASIC13.06□□□□□ -0.32
GabpaQ00422 Gm11422-201ENSMUST00000118925 1103 ntBASIC13.06□□□□□ -0.32
GabpaQ00422 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC13.06□□□□□ -0.32
GabpaQ00422 Gm14219-201ENSMUST00000120414 288 ntBASIC13.06□□□□□ -0.32
GabpaQ00422 Gm12628-201ENSMUST00000122193 382 ntBASIC13.06□□□□□ -0.32
GabpaQ00422 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
GabpaQ00422 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
GabpaQ00422 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
GabpaQ00422 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC13.06□□□□□ -0.32
GabpaQ00422 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC13.06□□□□□ -0.32
GabpaQ00422 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC13.06□□□□□ -0.32
GabpaQ00422 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GabpaQ00422 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC13.06□□□□□ -0.32
GabpaQ00422 Gm5342-201ENSMUST00000181982 1003 ntBASIC13.06□□□□□ -0.32
GabpaQ00422 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC13.06□□□□□ -0.32
GabpaQ00422 Mir7051-201ENSMUST00000184167 73 ntBASIC13.06□□□□□ -0.32
GabpaQ00422 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GabpaQ00422 Gm37284-201ENSMUST00000193607 539 ntBASIC13.06□□□□□ -0.32
GabpaQ00422 Gm9884-201ENSMUST00000194343 1222 ntBASIC13.06□□□□□ -0.32
GabpaQ00422 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
GabpaQ00422 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
GabpaQ00422 AC129308.3-201ENSMUST00000225652 524 ntBASIC13.06□□□□□ -0.32
GabpaQ00422 CT025602.2-201ENSMUST00000226553 772 ntBASIC13.06□□□□□ -0.32
GabpaQ00422 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GabpaQ00422 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms