Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup43P59235 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nup43P59235 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.92□□□□□ -0.66
Nup43P59235 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup43P59235 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC10.92□□□□□ -0.66
Nup43P59235 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup43P59235 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Nup43P59235 Gm6903-201ENSMUST00000160509 1366 ntBASIC10.91□□□□□ -0.66
Nup43P59235 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nup43P59235 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC10.91□□□□□ -0.66
Nup43P59235 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nup43P59235 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.91□□□□□ -0.66
Nup43P59235 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nup43P59235 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nup43P59235 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nup43P59235 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Nup43P59235 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nup43P59235 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nup43P59235 Gm11331-201ENSMUST00000119764 288 ntBASIC10.91□□□□□ -0.66
Nup43P59235 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nup43P59235 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Nup43P59235 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nup43P59235 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC10.91□□□□□ -0.66
Nup43P59235 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.91□□□□□ -0.66
Nup43P59235 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC10.91□□□□□ -0.66
Nup43P59235 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nup43P59235 Gm44506-201ENSMUST00000206278 965 ntBASIC10.91□□□□□ -0.66
Nup43P59235 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nup43P59235 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nup43P59235 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nup43P59235 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nup43P59235 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Nup43P59235 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nup43P59235 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nup43P59235 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nup43P59235 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nup43P59235 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nup43P59235 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nup43P59235 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.91□□□□□ -0.66
Nup43P59235 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nup43P59235 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Nup43P59235 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nup43P59235 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nup43P59235 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Nup43P59235 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Nup43P59235 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Nup43P59235 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nup43P59235 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.66
Nup43P59235 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nup43P59235 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nup43P59235 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.9□□□□□ -0.66
Nup43P59235 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nup43P59235 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nup43P59235 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nup43P59235 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC10.9□□□□□ -0.66
Nup43P59235 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Nup43P59235 Gm22920-201ENSMUST00000102175 109 ntBASIC10.9□□□□□ -0.66
Nup43P59235 Gm15432-201ENSMUST00000121106 195 ntBASIC10.9□□□□□ -0.66
Nup43P59235 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nup43P59235 Gm7150-201ENSMUST00000122032 981 ntBASIC10.9□□□□□ -0.66
Nup43P59235 Gm7666-201ENSMUST00000146631 819 ntBASIC10.9□□□□□ -0.66
Nup43P59235 Gm24844-201ENSMUST00000158679 127 ntBASIC10.9□□□□□ -0.66
Nup43P59235 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nup43P59235 Gm20495-201ENSMUST00000173902 235 ntBASIC10.9□□□□□ -0.66
Nup43P59235 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nup43P59235 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.9□□□□□ -0.66
Nup43P59235 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.9□□□□□ -0.66
Nup43P59235 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nup43P59235 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC10.9□□□□□ -0.66
Nup43P59235 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Nup43P59235 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nup43P59235 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nup43P59235 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nup43P59235 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Nup43P59235 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Nup43P59235 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nup43P59235 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nup43P59235 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nup43P59235 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nup43P59235 Erich3-203ENSMUST00000189969 3460 ntBASIC10.9□□□□□ -0.66
Nup43P59235 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Nup43P59235 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Nup43P59235 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Nup43P59235 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Nup43P59235 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Nup43P59235 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Nup43P59235 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Nup43P59235 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Nup43P59235 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nup43P59235 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup43P59235 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup43P59235 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup43P59235 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup43P59235 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup43P59235 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup43P59235 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup43P59235 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Nup43P59235 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nup43P59235 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup43P59235 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms