Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ddx6P54823 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ddx6P54823 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC11.74□□□□□ -0.53
Ddx6P54823 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Ddx6P54823 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC11.74□□□□□ -0.53
Ddx6P54823 AC153152.3-201ENSMUST00000222188 1135 ntBASIC11.74□□□□□ -0.53
Ddx6P54823 AC164618.2-201ENSMUST00000224770 573 ntBASIC11.74□□□□□ -0.53
Ddx6P54823 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Ddx6P54823 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.74□□□□□ -0.53
Ddx6P54823 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ddx6P54823 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ddx6P54823 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Ddx6P54823 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Ddx6P54823 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.74□□□□□ -0.53
Ddx6P54823 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ddx6P54823 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx6P54823 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx6P54823 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx6P54823 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx6P54823 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx6P54823 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx6P54823 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Ddx6P54823 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx6P54823 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx6P54823 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx6P54823 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ddx6P54823 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC11.73□□□□□ -0.53
Ddx6P54823 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC11.73□□□□□ -0.53
Ddx6P54823 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Ddx6P54823 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.73□□□□□ -0.53
Ddx6P54823 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.73□□□□□ -0.53
Ddx6P54823 Gm18294-201ENSMUST00000176980 1748 ntBASIC11.73□□□□□ -0.53
Ddx6P54823 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx6P54823 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.73□□□□□ -0.53
Ddx6P54823 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx6P54823 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx6P54823 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx6P54823 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx6P54823 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx6P54823 Gm39288-201ENSMUST00000210554 446 ntBASIC11.73□□□□□ -0.53
Ddx6P54823 Mt1-202ENSMUST00000211807 1085 ntBASIC11.73□□□□□ -0.53
Ddx6P54823 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.73□□□□□ -0.53
Ddx6P54823 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC11.73□□□□□ -0.53
Ddx6P54823 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx6P54823 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC11.73□□□□□ -0.53
Ddx6P54823 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx6P54823 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx6P54823 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx6P54823 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx6P54823 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx6P54823 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx6P54823 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx6P54823 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Ddx6P54823 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx6P54823 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx6P54823 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Ddx6P54823 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ddx6P54823 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx6P54823 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.73□□□□□ -0.53
Ddx6P54823 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx6P54823 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx6P54823 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx6P54823 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx6P54823 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx6P54823 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.73□□□□□ -0.53
Ddx6P54823 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx6P54823 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx6P54823 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.73□□□□□ -0.53
Ddx6P54823 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ddx6P54823 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx6P54823 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx6P54823 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Ddx6P54823 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ddx6P54823 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ddx6P54823 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ddx6P54823 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.72□□□□□ -0.53
Ddx6P54823 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ddx6P54823 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ddx6P54823 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ddx6P54823 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ddx6P54823 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ddx6P54823 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ddx6P54823 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ddx6P54823 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.72□□□□□ -0.53
Ddx6P54823 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ddx6P54823 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.72□□□□□ -0.53
Ddx6P54823 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Ddx6P54823 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Ddx6P54823 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ddx6P54823 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ddx6P54823 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ddx6P54823 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ddx6P54823 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ddx6P54823 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ddx6P54823 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ddx6P54823 Gm25053-201ENSMUST00000103982 133 ntBASIC11.72□□□□□ -0.53
Ddx6P54823 Gm25922-201ENSMUST00000104281 130 ntBASIC11.72□□□□□ -0.53
Ddx6P54823 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.72□□□□□ -0.53
Ddx6P54823 Gm14740-201ENSMUST00000118538 1150 ntBASIC11.72□□□□□ -0.53
Ddx6P54823 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms