Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pdx1P52946 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pdx1P52946 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.4□□□□□ -0.58
Pdx1P52946 Gm22920-201ENSMUST00000102175 109 ntBASIC11.4□□□□□ -0.58
Pdx1P52946 Gm14193-201ENSMUST00000105067 153 ntBASIC11.4□□□□□ -0.58
Pdx1P52946 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pdx1P52946 Gm22711-201ENSMUST00000116890 133 ntBASIC11.4□□□□□ -0.58
Pdx1P52946 Gm9062-201ENSMUST00000117712 727 ntBASIC11.4□□□□□ -0.58
Pdx1P52946 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.4□□□□□ -0.58
Pdx1P52946 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.4□□□□□ -0.58
Pdx1P52946 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.4□□□□□ -0.58
Pdx1P52946 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.4□□□□□ -0.58
Pdx1P52946 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.4□□□□□ -0.58
Pdx1P52946 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC11.4□□□□□ -0.58
Pdx1P52946 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.4□□□□□ -0.58
Pdx1P52946 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pdx1P52946 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.4□□□□□ -0.58
Pdx1P52946 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.4□□□□□ -0.58
Pdx1P52946 Mir5132-201ENSMUST00000175166 71 ntBASIC11.4□□□□□ -0.58
Pdx1P52946 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pdx1P52946 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pdx1P52946 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Pdx1P52946 Mir7686-201ENSMUST00000200604 57 ntBASIC11.4□□□□□ -0.58
Pdx1P52946 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pdx1P52946 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.4□□□□□ -0.58
Pdx1P52946 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pdx1P52946 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Pdx1P52946 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pdx1P52946 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Pdx1P52946 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pdx1P52946 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.4□□□□□ -0.58
Pdx1P52946 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pdx1P52946 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pdx1P52946 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.4□□□□□ -0.58
Pdx1P52946 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pdx1P52946 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pdx1P52946 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pdx1P52946 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pdx1P52946 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Pdx1P52946 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.4□□□□□ -0.59
Pdx1P52946 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pdx1P52946 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pdx1P52946 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pdx1P52946 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pdx1P52946 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pdx1P52946 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pdx1P52946 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdx1P52946 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdx1P52946 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdx1P52946 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdx1P52946 Gm9333-201ENSMUST00000205452 1323 ntBASIC11.39□□□□□ -0.59
Pdx1P52946 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdx1P52946 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdx1P52946 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.39□□□□□ -0.59
Pdx1P52946 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdx1P52946 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pdx1P52946 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdx1P52946 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdx1P52946 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Pdx1P52946 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdx1P52946 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.39□□□□□ -0.59
Pdx1P52946 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.39□□□□□ -0.59
Pdx1P52946 Gm10051-201ENSMUST00000145209 414 ntBASIC11.39□□□□□ -0.59
Pdx1P52946 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdx1P52946 Rn7s1-201ENSMUST00000174924 300 ntBASIC11.39□□□□□ -0.59
Pdx1P52946 Rn7s2-201ENSMUST00000175032 300 ntBASIC11.39□□□□□ -0.59
Pdx1P52946 Gm26461-201ENSMUST00000175064 290 ntBASIC11.39□□□□□ -0.59
Pdx1P52946 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pdx1P52946 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pdx1P52946 Gm7504-201ENSMUST00000201449 424 ntBASIC11.39□□□□□ -0.59
Pdx1P52946 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.39□□□□□ -0.59
Pdx1P52946 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pdx1P52946 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Pdx1P52946 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.39□□□□□ -0.59
Pdx1P52946 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.39□□□□□ -0.59
Pdx1P52946 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.39□□□□□ -0.59
Pdx1P52946 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdx1P52946 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.39□□□□□ -0.59
Pdx1P52946 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pdx1P52946 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.39□□□□□ -0.59
Pdx1P52946 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Pdx1P52946 Gm8420-201ENSMUST00000097103 598 ntBASIC11.39□□□□□ -0.59
Pdx1P52946 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Pdx1P52946 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdx1P52946 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdx1P52946 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdx1P52946 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdx1P52946 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdx1P52946 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Pdx1P52946 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.39□□□□□ -0.59
Pdx1P52946 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.39□□□□□ -0.59
Pdx1P52946 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdx1P52946 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdx1P52946 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pdx1P52946 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pdx1P52946 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdx1P52946 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pdx1P52946 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdx1P52946 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Pdx1P52946 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms