Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10.19□□□□□ -0.78
GdnfP48540 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.19□□□□□ -0.78
GdnfP48540 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
GdnfP48540 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
GdnfP48540 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
GdnfP48540 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
GdnfP48540 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
GdnfP48540 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
GdnfP48540 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
GdnfP48540 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
GdnfP48540 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
GdnfP48540 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
GdnfP48540 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
GdnfP48540 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
GdnfP48540 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
GdnfP48540 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
GdnfP48540 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
GdnfP48540 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
GdnfP48540 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.18□□□□□ -0.78
GdnfP48540 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
GdnfP48540 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
GdnfP48540 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
GdnfP48540 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.18□□□□□ -0.78
GdnfP48540 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
GdnfP48540 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
GdnfP48540 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
GdnfP48540 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
GdnfP48540 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
GdnfP48540 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
GdnfP48540 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
GdnfP48540 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
GdnfP48540 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
GdnfP48540 Gm12467-201ENSMUST00000117625 745 ntBASIC10.18□□□□□ -0.78
GdnfP48540 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
GdnfP48540 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC10.18□□□□□ -0.78
GdnfP48540 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC10.18□□□□□ -0.78
GdnfP48540 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC10.18□□□□□ -0.78
GdnfP48540 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
GdnfP48540 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
GdnfP48540 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
GdnfP48540 Gm38341-201ENSMUST00000195357 515 ntBASIC10.18□□□□□ -0.78
GdnfP48540 Gm43002-201ENSMUST00000200310 155 ntBASIC10.18□□□□□ -0.78
GdnfP48540 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC10.18□□□□□ -0.78
GdnfP48540 Gm21769-201ENSMUST00000211922 111 ntBASIC10.18□□□□□ -0.78
GdnfP48540 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
GdnfP48540 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
GdnfP48540 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
GdnfP48540 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
GdnfP48540 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
GdnfP48540 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
GdnfP48540 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
GdnfP48540 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
GdnfP48540 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
GdnfP48540 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
GdnfP48540 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
GdnfP48540 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
GdnfP48540 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
GdnfP48540 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
GdnfP48540 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.18□□□□□ -0.78
GdnfP48540 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
GdnfP48540 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
GdnfP48540 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
GdnfP48540 Gm43868-201ENSMUST00000205187 2114 ntBASIC10.18□□□□□ -0.78
GdnfP48540 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
GdnfP48540 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
GdnfP48540 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
GdnfP48540 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
GdnfP48540 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
GdnfP48540 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
GdnfP48540 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
GdnfP48540 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
GdnfP48540 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
GdnfP48540 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.17□□□□□ -0.78
GdnfP48540 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
GdnfP48540 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
GdnfP48540 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
GdnfP48540 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
GdnfP48540 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
GdnfP48540 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
GdnfP48540 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.17□□□□□ -0.78
GdnfP48540 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
GdnfP48540 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.17□□□□□ -0.78
GdnfP48540 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
GdnfP48540 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC10.17□□□□□ -0.78
GdnfP48540 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
GdnfP48540 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
GdnfP48540 Gm8862-201ENSMUST00000198379 1346 ntBASIC10.17□□□□□ -0.78
GdnfP48540 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
GdnfP48540 Gm24830-201ENSMUST00000102024 166 ntBASIC10.17□□□□□ -0.78
GdnfP48540 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC10.17□□□□□ -0.78
GdnfP48540 Gm11222-201ENSMUST00000119005 738 ntBASIC10.17□□□□□ -0.78
GdnfP48540 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
GdnfP48540 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC10.17□□□□□ -0.78
GdnfP48540 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.17□□□□□ -0.78
GdnfP48540 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
GdnfP48540 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
GdnfP48540 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
GdnfP48540 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
GdnfP48540 Gm31256-201ENSMUST00000194705 506 ntBASIC10.17□□□□□ -0.78
GdnfP48540 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms