Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps4bP46467 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps4bP46467 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps4bP46467 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps4bP46467 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps4bP46467 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps4bP46467 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vps4bP46467 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps4bP46467 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Vps4bP46467 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps4bP46467 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps4bP46467 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps4bP46467 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vps4bP46467 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps4bP46467 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Vps4bP46467 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps4bP46467 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps4bP46467 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps4bP46467 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vps4bP46467 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.72□□□□□ -0.53
Vps4bP46467 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps4bP46467 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps4bP46467 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.72□□□□□ -0.53
Vps4bP46467 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Vps4bP46467 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vps4bP46467 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps4bP46467 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vps4bP46467 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps4bP46467 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Vps4bP46467 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps4bP46467 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Vps4bP46467 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.72□□□□□ -0.53
Vps4bP46467 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.72□□□□□ -0.53
Vps4bP46467 Gm26361-201ENSMUST00000158868 186 ntBASIC11.72□□□□□ -0.53
Vps4bP46467 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.72□□□□□ -0.53
Vps4bP46467 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.72□□□□□ -0.53
Vps4bP46467 Gm25700-201ENSMUST00000177693 110 ntBASIC11.72□□□□□ -0.53
Vps4bP46467 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vps4bP46467 Mir6927-201ENSMUST00000184494 71 ntBASIC11.72□□□□□ -0.53
Vps4bP46467 AU022133-201ENSMUST00000200601 873 ntBASIC11.72□□□□□ -0.53
Vps4bP46467 Gm45186-201ENSMUST00000206874 478 ntBASIC11.72□□□□□ -0.53
Vps4bP46467 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vps4bP46467 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps4bP46467 Gm8959-201ENSMUST00000213150 571 ntBASIC11.72□□□□□ -0.53
Vps4bP46467 Gm9797-202ENSMUST00000218003 294 ntBASIC11.72□□□□□ -0.53
Vps4bP46467 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps4bP46467 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps4bP46467 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vps4bP46467 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Vps4bP46467 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps4bP46467 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.72□□□□□ -0.53
Vps4bP46467 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps4bP46467 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps4bP46467 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps4bP46467 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps4bP46467 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vps4bP46467 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.72□□□□□ -0.53
Vps4bP46467 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps4bP46467 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.72□□□□□ -0.53
Vps4bP46467 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps4bP46467 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps4bP46467 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps4bP46467 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps4bP46467 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Vps4bP46467 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps4bP46467 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.71□□□□□ -0.53
Vps4bP46467 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps4bP46467 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.71□□□□□ -0.53
Vps4bP46467 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Vps4bP46467 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps4bP46467 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Vps4bP46467 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.71□□□□□ -0.53
Vps4bP46467 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Vps4bP46467 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Vps4bP46467 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.71□□□□□ -0.53
Vps4bP46467 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps4bP46467 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.71□□□□□ -0.53
Vps4bP46467 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps4bP46467 Gm4310-201ENSMUST00000177847 889 ntBASIC11.71□□□□□ -0.53
Vps4bP46467 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.71□□□□□ -0.53
Vps4bP46467 Mir7677-201ENSMUST00000184226 67 ntBASIC11.71□□□□□ -0.53
Vps4bP46467 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Vps4bP46467 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.71□□□□□ -0.53
Vps4bP46467 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.71□□□□□ -0.53
Vps4bP46467 Gm7940-201ENSMUST00000218195 769 ntBASIC11.71□□□□□ -0.53
Vps4bP46467 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps4bP46467 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps4bP46467 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps4bP46467 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps4bP46467 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps4bP46467 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Vps4bP46467 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Vps4bP46467 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Vps4bP46467 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.54
Vps4bP46467 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Vps4bP46467 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Vps4bP46467 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Vps4bP46467 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Vps4bP46467 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.71□□□□□ -0.54
Vps4bP46467 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms