Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-6P43688 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-6P43688 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-6P43688 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Nkx2-6P43688 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-6P43688 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Nkx2-6P43688 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-6P43688 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.94□□□□□ -0.66
Nkx2-6P43688 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Mir6958-201ENSMUST00000184207 73 ntBASIC10.94□□□□□ -0.66
Nkx2-6P43688 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Gm19091-201ENSMUST00000208120 978 ntBASIC10.94□□□□□ -0.66
Nkx2-6P43688 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC10.94□□□□□ -0.66
Nkx2-6P43688 CT025551.1-201ENSMUST00000223996 692 ntBASIC10.94□□□□□ -0.66
Nkx2-6P43688 AC165154.1-201ENSMUST00000226661 340 ntBASIC10.94□□□□□ -0.66
Nkx2-6P43688 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Gm4978-201ENSMUST00000071565 801 ntBASIC10.94□□□□□ -0.66
Nkx2-6P43688 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-6P43688 AC166836.1-201ENSMUST00000219933 1795 ntBASIC10.94□□□□□ -0.66
Nkx2-6P43688 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-6P43688 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-6P43688 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Gm42913-201ENSMUST00000197936 1853 ntBASIC10.93□□□□□ -0.66
Nkx2-6P43688 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-6P43688 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC10.93□□□□□ -0.66
Nkx2-6P43688 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms