Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msh2P43247 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msh2P43247 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msh2P43247 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC11.9□□□□□ -0.5
Msh2P43247 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Msh2P43247 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Msh2P43247 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msh2P43247 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Msh2P43247 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msh2P43247 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.9□□□□□ -0.5
Msh2P43247 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Msh2P43247 AC207128.2-201ENSMUST00000223708 1924 ntBASIC11.9□□□□□ -0.5
Msh2P43247 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.9□□□□□ -0.5
Msh2P43247 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.9□□□□□ -0.5
Msh2P43247 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msh2P43247 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msh2P43247 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Msh2P43247 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Msh2P43247 Gm15610-201ENSMUST00000120584 195 ntBASIC11.9□□□□□ -0.5
Msh2P43247 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Msh2P43247 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.9□□□□□ -0.5
Msh2P43247 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Msh2P43247 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Msh2P43247 Gm2383-201ENSMUST00000181461 807 ntBASIC11.9□□□□□ -0.5
Msh2P43247 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.9□□□□□ -0.5
Msh2P43247 Gm45186-201ENSMUST00000206874 478 ntBASIC11.9□□□□□ -0.5
Msh2P43247 Gm18056-201ENSMUST00000207670 568 ntBASIC11.9□□□□□ -0.5
Msh2P43247 Gm18061-201ENSMUST00000208350 562 ntBASIC11.9□□□□□ -0.5
Msh2P43247 Gm18063-201ENSMUST00000208529 568 ntBASIC11.9□□□□□ -0.5
Msh2P43247 Gm18052-201ENSMUST00000208750 559 ntBASIC11.9□□□□□ -0.5
Msh2P43247 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.9□□□□□ -0.5
Msh2P43247 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.9□□□□□ -0.5
Msh2P43247 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.9□□□□□ -0.5
Msh2P43247 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.9□□□□□ -0.5
Msh2P43247 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msh2P43247 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Msh2P43247 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msh2P43247 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msh2P43247 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Msh2P43247 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Msh2P43247 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msh2P43247 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msh2P43247 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Msh2P43247 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Msh2P43247 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Msh2P43247 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Msh2P43247 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msh2P43247 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Msh2P43247 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Msh2P43247 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Msh2P43247 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Msh2P43247 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Msh2P43247 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Msh2P43247 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msh2P43247 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Msh2P43247 Gm44369-201ENSMUST00000204543 2175 ntBASIC11.89□□□□□ -0.51
Msh2P43247 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.89□□□□□ -0.51
Msh2P43247 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msh2P43247 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Msh2P43247 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Msh2P43247 AC154171.2-201ENSMUST00000225219 2652 ntBASIC11.89□□□□□ -0.51
Msh2P43247 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.89□□□□□ -0.51
Msh2P43247 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msh2P43247 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Msh2P43247 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.89□□□□□ -0.51
Msh2P43247 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msh2P43247 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Msh2P43247 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Msh2P43247 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msh2P43247 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msh2P43247 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Msh2P43247 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.89□□□□□ -0.51
Msh2P43247 Gm12164-201ENSMUST00000121695 551 ntBASIC11.89□□□□□ -0.51
Msh2P43247 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msh2P43247 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.89□□□□□ -0.51
Msh2P43247 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msh2P43247 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msh2P43247 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Msh2P43247 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.89□□□□□ -0.51
Msh2P43247 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Msh2P43247 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.89□□□□□ -0.51
Msh2P43247 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.89□□□□□ -0.51
Msh2P43247 Gm43962-201ENSMUST00000203898 190 ntBASIC11.89□□□□□ -0.51
Msh2P43247 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.89□□□□□ -0.51
Msh2P43247 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.89□□□□□ -0.51
Msh2P43247 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.89□□□□□ -0.51
Msh2P43247 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.89□□□□□ -0.51
Msh2P43247 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msh2P43247 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msh2P43247 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msh2P43247 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Msh2P43247 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msh2P43247 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Msh2P43247 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Msh2P43247 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msh2P43247 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.89□□□□□ -0.51
Msh2P43247 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msh2P43247 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC11.89□□□□□ -0.51
Msh2P43247 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.89□□□□□ -0.51
Msh2P43247 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms