Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx1-2P42580 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx1-2P42580 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Nkx1-2P42580 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Nkx1-2P42580 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx1-2P42580 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Nkx1-2P42580 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Nkx1-2P42580 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx1-2P42580 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx1-2P42580 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx1-2P42580 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx1-2P42580 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx1-2P42580 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Nkx1-2P42580 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Nkx1-2P42580 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC14.16□□□□□ -0.14
Nkx1-2P42580 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
Nkx1-2P42580 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx1-2P42580 Mir8093-201ENSMUST00000185043 137 ntBASIC14.16□□□□□ -0.14
Nkx1-2P42580 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx1-2P42580 Ighv4-2-201ENSMUST00000192975 362 ntBASIC14.16□□□□□ -0.14
Nkx1-2P42580 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Nkx1-2P42580 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC14.16□□□□□ -0.14
Nkx1-2P42580 Gm6082-201ENSMUST00000215204 454 ntBASIC14.16□□□□□ -0.14
Nkx1-2P42580 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC14.16□□□□□ -0.14
Nkx1-2P42580 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Nkx1-2P42580 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx1-2P42580 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx1-2P42580 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx1-2P42580 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx1-2P42580 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx1-2P42580 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx1-2P42580 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx1-2P42580 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx1-2P42580 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx1-2P42580 Gm38376-201ENSMUST00000195493 2253 ntBASIC14.16□□□□□ -0.14
Nkx1-2P42580 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx1-2P42580 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx1-2P42580 Crry-ps-201ENSMUST00000079090 1309 ntBASIC14.15□□□□□ -0.14
Nkx1-2P42580 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx1-2P42580 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
Nkx1-2P42580 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Gm18798-201ENSMUST00000187264 1700 ntBASIC14.15□□□□□ -0.14
Nkx1-2P42580 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC14.15□□□□□ -0.14
Nkx1-2P42580 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx1-2P42580 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Gm12799-201ENSMUST00000118151 2560 ntBASIC14.15□□□□□ -0.14
Nkx1-2P42580 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Gm25668-201ENSMUST00000157700 129 ntBASIC14.15□□□□□ -0.14
Nkx1-2P42580 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Gm27530-201ENSMUST00000184096 98 ntBASIC14.15□□□□□ -0.14
Nkx1-2P42580 Gm29615-201ENSMUST00000185371 697 ntBASIC14.15□□□□□ -0.14
Nkx1-2P42580 Gm28224-201ENSMUST00000186078 697 ntBASIC14.15□□□□□ -0.14
Nkx1-2P42580 Gm29001-201ENSMUST00000186177 697 ntBASIC14.15□□□□□ -0.14
Nkx1-2P42580 Gm28292-201ENSMUST00000186593 697 ntBASIC14.15□□□□□ -0.14
Nkx1-2P42580 Gm28101-201ENSMUST00000187608 697 ntBASIC14.15□□□□□ -0.14
Nkx1-2P42580 Gm29076-201ENSMUST00000187689 697 ntBASIC14.15□□□□□ -0.14
Nkx1-2P42580 Gm28302-201ENSMUST00000187931 697 ntBASIC14.15□□□□□ -0.14
Nkx1-2P42580 Gm28646-201ENSMUST00000188220 697 ntBASIC14.15□□□□□ -0.14
Nkx1-2P42580 Gm28205-201ENSMUST00000189177 697 ntBASIC14.15□□□□□ -0.14
Nkx1-2P42580 Gm29032-201ENSMUST00000189797 697 ntBASIC14.15□□□□□ -0.14
Nkx1-2P42580 Gm28695-201ENSMUST00000190300 697 ntBASIC14.15□□□□□ -0.14
Nkx1-2P42580 Gm37448-201ENSMUST00000192795 697 ntBASIC14.15□□□□□ -0.14
Nkx1-2P42580 Gm38228-201ENSMUST00000193169 1293 ntBASIC14.15□□□□□ -0.14
Nkx1-2P42580 Gm44262-201ENSMUST00000204969 372 ntBASIC14.15□□□□□ -0.14
Nkx1-2P42580 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Olfr582-201ENSMUST00000098212 960 ntBASIC14.15□□□□□ -0.14
Nkx1-2P42580 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms