Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox6P40645 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sox6P40645 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox6P40645 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox6P40645 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sox6P40645 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox6P40645 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
Sox6P40645 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sox6P40645 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox6P40645 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sox6P40645 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox6P40645 Gm43908-201ENSMUST00000205074 1472 ntBASIC10.87□□□□□ -0.67
Sox6P40645 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox6P40645 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.86□□□□□ -0.67
Sox6P40645 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox6P40645 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox6P40645 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox6P40645 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox6P40645 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox6P40645 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox6P40645 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox6P40645 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox6P40645 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox6P40645 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Sox6P40645 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Sox6P40645 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Sox6P40645 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.86□□□□□ -0.67
Sox6P40645 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Sox6P40645 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox6P40645 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.86□□□□□ -0.67
Sox6P40645 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox6P40645 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Sox6P40645 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sox6P40645 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sox6P40645 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.86□□□□□ -0.67
Sox6P40645 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC10.86□□□□□ -0.67
Sox6P40645 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.86□□□□□ -0.67
Sox6P40645 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Sox6P40645 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC10.86□□□□□ -0.67
Sox6P40645 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox6P40645 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox6P40645 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox6P40645 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox6P40645 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox6P40645 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC10.86□□□□□ -0.67
Sox6P40645 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Sox6P40645 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Sox6P40645 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sox6P40645 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox6P40645 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Sox6P40645 Gm45495-201ENSMUST00000200940 1700 ntBASIC10.86□□□□□ -0.67
Sox6P40645 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox6P40645 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Sox6P40645 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox6P40645 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox6P40645 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Sox6P40645 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Sox6P40645 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC10.86□□□□□ -0.67
Sox6P40645 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Sox6P40645 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox6P40645 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox6P40645 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Sox6P40645 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox6P40645 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox6P40645 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.85□□□□□ -0.67
Sox6P40645 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox6P40645 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox6P40645 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox6P40645 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox6P40645 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.85□□□□□ -0.67
Sox6P40645 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox6P40645 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox6P40645 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.85□□□□□ -0.67
Sox6P40645 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox6P40645 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Sox6P40645 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox6P40645 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox6P40645 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox6P40645 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Sox6P40645 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Sox6P40645 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Sox6P40645 Mir877-201ENSMUST00000104738 85 ntBASIC10.85□□□□□ -0.67
Sox6P40645 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox6P40645 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.85□□□□□ -0.67
Sox6P40645 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.85□□□□□ -0.67
Sox6P40645 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.85□□□□□ -0.67
Sox6P40645 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC10.85□□□□□ -0.67
Sox6P40645 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox6P40645 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.85□□□□□ -0.67
Sox6P40645 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox6P40645 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox6P40645 Gm4819-201ENSMUST00000182170 1009 ntBASIC10.85□□□□□ -0.67
Sox6P40645 Gm8856-201ENSMUST00000185254 1144 ntBASIC10.85□□□□□ -0.67
Sox6P40645 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox6P40645 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.85□□□□□ -0.67
Sox6P40645 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC10.85□□□□□ -0.67
Sox6P40645 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC10.85□□□□□ -0.67
Sox6P40645 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC10.85□□□□□ -0.67
Sox6P40645 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox6P40645 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms