Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
VhlP40338 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
VhlP40338 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
VhlP40338 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
VhlP40338 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
VhlP40338 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
VhlP40338 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC9.48□□□□□ -0.89
VhlP40338 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
VhlP40338 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
VhlP40338 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC9.48□□□□□ -0.89
VhlP40338 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
VhlP40338 AC171277.1-201ENSMUST00000216902 1441 ntBASIC9.48□□□□□ -0.89
VhlP40338 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
VhlP40338 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
VhlP40338 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC9.47□□□□□ -0.89
VhlP40338 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
VhlP40338 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
VhlP40338 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
VhlP40338 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC9.47□□□□□ -0.89
VhlP40338 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
VhlP40338 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
VhlP40338 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
VhlP40338 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
VhlP40338 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
VhlP40338 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
VhlP40338 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
VhlP40338 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC9.47□□□□□ -0.89
VhlP40338 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
VhlP40338 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
VhlP40338 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
VhlP40338 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
VhlP40338 Gm11531-201ENSMUST00000117614 555 ntBASIC9.47□□□□□ -0.89
VhlP40338 Gm15004-201ENSMUST00000119192 630 ntBASIC9.47□□□□□ -0.89
VhlP40338 Gm4986-201ENSMUST00000119731 549 ntBASIC9.47□□□□□ -0.89
VhlP40338 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC9.47□□□□□ -0.89
VhlP40338 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC9.47□□□□□ -0.89
VhlP40338 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC9.47□□□□□ -0.89
VhlP40338 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC9.47□□□□□ -0.89
VhlP40338 Gm37008-201ENSMUST00000195712 319 ntBASIC9.47□□□□□ -0.89
VhlP40338 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC9.47□□□□□ -0.89
VhlP40338 Gm4607-201ENSMUST00000206649 577 ntBASIC9.47□□□□□ -0.89
VhlP40338 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
VhlP40338 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
VhlP40338 AC160929.1-201ENSMUST00000221247 415 ntBASIC9.47□□□□□ -0.89
VhlP40338 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC9.47□□□□□ -0.89
VhlP40338 CT009713.10-202ENSMUST00000225734 696 ntBASIC9.47□□□□□ -0.89
VhlP40338 AC113031.8-201ENSMUST00000227856 631 ntBASIC9.47□□□□□ -0.89
VhlP40338 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
VhlP40338 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
VhlP40338 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
VhlP40338 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
VhlP40338 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC9.47□□□□□ -0.89
VhlP40338 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
VhlP40338 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
VhlP40338 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
VhlP40338 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
VhlP40338 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC9.47□□□□□ -0.89
VhlP40338 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
VhlP40338 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
VhlP40338 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
VhlP40338 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC9.47□□□□□ -0.89
VhlP40338 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
VhlP40338 Erich3-203ENSMUST00000189969 3460 ntBASIC9.47□□□□□ -0.89
VhlP40338 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
VhlP40338 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
VhlP40338 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
VhlP40338 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
VhlP40338 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
VhlP40338 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
VhlP40338 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
VhlP40338 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
VhlP40338 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
VhlP40338 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
VhlP40338 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
VhlP40338 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
VhlP40338 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
VhlP40338 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
VhlP40338 Gm37954-201ENSMUST00000195400 2071 ntBASIC9.46□□□□□ -0.89
VhlP40338 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
VhlP40338 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
VhlP40338 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
VhlP40338 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC9.46□□□□□ -0.89
VhlP40338 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
VhlP40338 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
VhlP40338 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
VhlP40338 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
VhlP40338 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
VhlP40338 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
VhlP40338 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
VhlP40338 Gm12957-201ENSMUST00000117835 377 ntBASIC9.46□□□□□ -0.9
VhlP40338 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC9.46□□□□□ -0.9
VhlP40338 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC9.46□□□□□ -0.9
VhlP40338 Gm17420-201ENSMUST00000164753 153 ntBASIC9.46□□□□□ -0.9
VhlP40338 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC9.46□□□□□ -0.9
VhlP40338 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
VhlP40338 Gm29164-201ENSMUST00000185454 1024 ntBASIC9.46□□□□□ -0.9
VhlP40338 Gm19187-201ENSMUST00000206781 892 ntBASIC9.46□□□□□ -0.9
VhlP40338 Gm6013-201ENSMUST00000212264 699 ntBASIC9.46□□□□□ -0.9
VhlP40338 AC159896.2-201ENSMUST00000214753 269 ntBASIC9.46□□□□□ -0.9
VhlP40338 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC9.46□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms