Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd1P40201 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Chd1P40201 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chd1P40201 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd1P40201 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd1P40201 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd1P40201 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd1P40201 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd1P40201 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd1P40201 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd1P40201 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Chd1P40201 Gm44831-201ENSMUST00000208469 2989 ntBASIC16.91■□□□□ 0.3
Chd1P40201 Gm38194-201ENSMUST00000194529 2211 ntBASIC16.91■□□□□ 0.3
Chd1P40201 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Chd1P40201 Mir291b-201ENSMUST00000104838 79 ntBASIC16.91■□□□□ 0.3
Chd1P40201 Gm8754-201ENSMUST00000118391 520 ntBASIC16.91■□□□□ 0.3
Chd1P40201 Cyp2j15-ps-201ENSMUST00000122267 686 ntBASIC16.91■□□□□ 0.3
Chd1P40201 Gm23479-201ENSMUST00000158876 122 ntBASIC16.91■□□□□ 0.3
Chd1P40201 Gm5501-201ENSMUST00000165917 832 ntBASIC16.91■□□□□ 0.3
Chd1P40201 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC16.91■□□□□ 0.3
Chd1P40201 Gm43103-201ENSMUST00000199021 802 ntBASIC16.91■□□□□ 0.3
Chd1P40201 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Chd1P40201 Gm36172-201ENSMUST00000219852 723 ntTSL 3 BASIC16.91■□□□□ 0.3
Chd1P40201 AC124772.3-201ENSMUST00000222535 575 ntBASIC16.91■□□□□ 0.3
Chd1P40201 Olfr128-201ENSMUST00000080231 1050 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Chd1P40201 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd1P40201 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Chd1P40201 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Chd1P40201 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Chd1P40201 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd1P40201 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Chd1P40201 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd1P40201 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd1P40201 Gm7790-201ENSMUST00000118716 1310 ntBASIC16.91■□□□□ 0.3
Chd1P40201 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Chd1P40201 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.9■□□□□ 0.3
Chd1P40201 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.9■□□□□ 0.3
Chd1P40201 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Chd1P40201 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd1P40201 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd1P40201 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd1P40201 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Chd1P40201 Faap24-203ENSMUST00000154597 831 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Chd1P40201 Tspy-ps-203ENSMUST00000186546 989 ntBASIC16.9■□□□□ 0.3
Chd1P40201 Gm7815-201ENSMUST00000196104 832 ntBASIC16.9■□□□□ 0.3
Chd1P40201 Gm43450-201ENSMUST00000202611 632 ntTSL 3 BASIC16.9■□□□□ 0.3
Chd1P40201 Rps4l-ps-201ENSMUST00000059737 768 ntBASIC16.9■□□□□ 0.3
Chd1P40201 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Chd1P40201 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.9■□□□□ 0.3
Chd1P40201 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chd1P40201 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chd1P40201 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Chd1P40201 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd1P40201 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chd1P40201 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Chd1P40201 Fhl1-206ENSMUST00000116596 1203 ntTSL 5 BASIC16.9■□□□□ 0.3
Chd1P40201 Gm12047-201ENSMUST00000117561 944 ntBASIC16.9■□□□□ 0.3
Chd1P40201 Gm44805-201ENSMUST00000127648 765 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Chd1P40201 Gm15650-201ENSMUST00000135451 770 ntTSL 3 BASIC16.9■□□□□ 0.3
Chd1P40201 Gm43002-201ENSMUST00000200310 155 ntBASIC16.9■□□□□ 0.3
Chd1P40201 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC16.9■□□□□ 0.3
Chd1P40201 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC16.9■□□□□ 0.3
Chd1P40201 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd1P40201 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Chd1P40201 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd1P40201 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd1P40201 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Chd1P40201 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.3
Chd1P40201 Gm9544-201ENSMUST00000223349 2482 ntBASIC16.89■□□□□ 0.3
Chd1P40201 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Chd1P40201 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC16.89■□□□□ 0.29
Chd1P40201 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Chd1P40201 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd1P40201 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Chd1P40201 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Chd1P40201 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd1P40201 Slc10a4-202ENSMUST00000201304 1419 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Chd1P40201 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Chd1P40201 Gm13215-201ENSMUST00000117559 472 ntBASIC16.89■□□□□ 0.29
Chd1P40201 Rpl17-ps11-201ENSMUST00000161946 729 ntBASIC16.89■□□□□ 0.29
Chd1P40201 Gm27390-201ENSMUST00000184516 176 ntBASIC16.89■□□□□ 0.29
Chd1P40201 Mir8104-201ENSMUST00000185165 101 ntBASIC16.89■□□□□ 0.29
Chd1P40201 Gm38038-201ENSMUST00000193803 259 ntBASIC16.89■□□□□ 0.29
Chd1P40201 Rps27-202ENSMUST00000195998 458 ntTSL 5 BASIC16.89■□□□□ 0.29
Chd1P40201 Gm18042-201ENSMUST00000219887 790 ntBASIC16.89■□□□□ 0.29
Chd1P40201 AC174647.1-201ENSMUST00000227419 1271 ntBASIC16.89■□□□□ 0.29
Chd1P40201 Olfr761-201ENSMUST00000049620 1029 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Chd1P40201 Gm10254-201ENSMUST00000052888 867 ntBASIC16.89■□□□□ 0.29
Chd1P40201 Olfr127-201ENSMUST00000076331 1095 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Chd1P40201 Gm5148-202ENSMUST00000099128 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd1P40201 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd1P40201 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd1P40201 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd1P40201 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd1P40201 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd1P40201 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd1P40201 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd1P40201 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Chd1P40201 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd1P40201 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 154 ms