Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Upk2P38575 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC10.11□□□□□ -0.79
Upk2P38575 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC10.11□□□□□ -0.79
Upk2P38575 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Upk2P38575 Gm29499-201ENSMUST00000189151 486 ntBASIC10.11□□□□□ -0.79
Upk2P38575 Gm28329-201ENSMUST00000191208 689 ntBASIC10.11□□□□□ -0.79
Upk2P38575 Gm29171-201ENSMUST00000191397 486 ntBASIC10.11□□□□□ -0.79
Upk2P38575 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC10.11□□□□□ -0.79
Upk2P38575 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC10.11□□□□□ -0.79
Upk2P38575 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Upk2P38575 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC10.11□□□□□ -0.79
Upk2P38575 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Upk2P38575 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Upk2P38575 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Upk2P38575 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.11□□□□□ -0.79
Upk2P38575 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Upk2P38575 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Upk2P38575 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.11□□□□□ -0.79
Upk2P38575 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Upk2P38575 Gm37105-201ENSMUST00000192251 2085 ntBASIC10.11□□□□□ -0.79
Upk2P38575 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Upk2P38575 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Upk2P38575 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Upk2P38575 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Upk2P38575 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Upk2P38575 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Upk2P38575 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Upk2P38575 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
Upk2P38575 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Upk2P38575 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Upk2P38575 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Upk2P38575 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC10.1□□□□□ -0.79
Upk2P38575 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Upk2P38575 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Upk2P38575 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.1□□□□□ -0.79
Upk2P38575 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.1□□□□□ -0.79
Upk2P38575 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Upk2P38575 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Upk2P38575 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Upk2P38575 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Upk2P38575 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Upk2P38575 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Upk2P38575 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Upk2P38575 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Upk2P38575 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Upk2P38575 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Upk2P38575 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.1□□□□□ -0.79
Upk2P38575 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Upk2P38575 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC10.1□□□□□ -0.79
Upk2P38575 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Upk2P38575 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Upk2P38575 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Upk2P38575 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.1□□□□□ -0.79
Upk2P38575 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Upk2P38575 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
Upk2P38575 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Upk2P38575 Btrc-209ENSMUST00000224478 2194 ntBASIC10.1□□□□□ -0.79
Upk2P38575 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Upk2P38575 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Upk2P38575 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Upk2P38575 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Upk2P38575 Gm7851-201ENSMUST00000117574 323 ntBASIC10.1□□□□□ -0.79
Upk2P38575 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Upk2P38575 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC10.1□□□□□ -0.79
Upk2P38575 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC10.1□□□□□ -0.79
Upk2P38575 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC10.1□□□□□ -0.79
Upk2P38575 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC10.1□□□□□ -0.79
Upk2P38575 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC10.1□□□□□ -0.79
Upk2P38575 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Upk2P38575 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC10.1□□□□□ -0.79
Upk2P38575 AC164437.3-201ENSMUST00000228323 347 ntBASIC10.1□□□□□ -0.79
Upk2P38575 Mir433-201ENSMUST00000093564 124 ntBASIC10.1□□□□□ -0.79
Upk2P38575 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Upk2P38575 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Upk2P38575 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Upk2P38575 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Upk2P38575 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Upk2P38575 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Upk2P38575 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Upk2P38575 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Upk2P38575 Gm6580-201ENSMUST00000117504 1357 ntBASIC10.1□□□□□ -0.79
Upk2P38575 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Upk2P38575 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Upk2P38575 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Upk2P38575 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Upk2P38575 Adgrv1-214ENSMUST00000224088 1492 ntBASIC10.1□□□□□ -0.79
Upk2P38575 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Upk2P38575 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Upk2P38575 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Upk2P38575 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Upk2P38575 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC10.09□□□□□ -0.79
Upk2P38575 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Upk2P38575 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Upk2P38575 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Upk2P38575 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Upk2P38575 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.09□□□□□ -0.79
Upk2P38575 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Upk2P38575 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Upk2P38575 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.09□□□□□ -0.79
Upk2P38575 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms