Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.94□□□□□ -0.34
Col2a1P28481 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col2a1P28481 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col2a1P28481 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC12.94□□□□□ -0.34
Col2a1P28481 Gm13047-201ENSMUST00000117116 815 ntBASIC12.94□□□□□ -0.34
Col2a1P28481 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Col2a1P28481 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col2a1P28481 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col2a1P28481 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col2a1P28481 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC12.94□□□□□ -0.34
Col2a1P28481 Gm42660-201ENSMUST00000197733 947 ntBASIC12.94□□□□□ -0.34
Col2a1P28481 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.94□□□□□ -0.34
Col2a1P28481 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC12.94□□□□□ -0.34
Col2a1P28481 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC12.94□□□□□ -0.34
Col2a1P28481 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC12.94□□□□□ -0.34
Col2a1P28481 Gm8325-201ENSMUST00000099086 453 ntBASIC12.94□□□□□ -0.34
Col2a1P28481 Gm42499-201ENSMUST00000196193 1412 ntBASIC12.94□□□□□ -0.34
Col2a1P28481 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col2a1P28481 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col2a1P28481 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col2a1P28481 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col2a1P28481 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col2a1P28481 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col2a1P28481 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Col2a1P28481 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.94□□□□□ -0.34
Col2a1P28481 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col2a1P28481 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.94□□□□□ -0.34
Col2a1P28481 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col2a1P28481 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Col2a1P28481 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col2a1P28481 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col2a1P28481 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Col2a1P28481 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Col2a1P28481 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Col2a1P28481 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Col2a1P28481 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col2a1P28481 Gm5641-201ENSMUST00000091130 1488 ntBASIC12.93□□□□□ -0.34
Col2a1P28481 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col2a1P28481 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col2a1P28481 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col2a1P28481 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col2a1P28481 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC12.93□□□□□ -0.34
Col2a1P28481 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col2a1P28481 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col2a1P28481 Gm15003-201ENSMUST00000118884 446 ntBASIC12.93□□□□□ -0.34
Col2a1P28481 Gm12969-201ENSMUST00000120199 1004 ntBASIC12.93□□□□□ -0.34
Col2a1P28481 Gm15196-201ENSMUST00000121406 482 ntBASIC12.93□□□□□ -0.34
Col2a1P28481 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC12.93□□□□□ -0.34
Col2a1P28481 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC12.93□□□□□ -0.34
Col2a1P28481 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col2a1P28481 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC12.93□□□□□ -0.34
Col2a1P28481 Gm17214-201ENSMUST00000164501 541 ntBASIC12.93□□□□□ -0.34
Col2a1P28481 Gm4862-201ENSMUST00000170405 438 ntBASIC12.93□□□□□ -0.34
Col2a1P28481 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Col2a1P28481 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Col2a1P28481 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Col2a1P28481 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Col2a1P28481 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Col2a1P28481 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Col2a1P28481 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Col2a1P28481 Gm20781-201ENSMUST00000193154 693 ntBASIC12.93□□□□□ -0.34
Col2a1P28481 Gm21736-201ENSMUST00000195399 693 ntBASIC12.93□□□□□ -0.34
Col2a1P28481 Gm31274-201ENSMUST00000197356 229 ntBASIC12.93□□□□□ -0.34
Col2a1P28481 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.93□□□□□ -0.34
Col2a1P28481 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.93□□□□□ -0.34
Col2a1P28481 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col2a1P28481 AC159196.1-201ENSMUST00000225524 377 ntBASIC12.93□□□□□ -0.34
Col2a1P28481 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col2a1P28481 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col2a1P28481 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col2a1P28481 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col2a1P28481 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col2a1P28481 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Col2a1P28481 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col2a1P28481 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col2a1P28481 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col2a1P28481 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col2a1P28481 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col2a1P28481 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Col2a1P28481 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.93□□□□□ -0.34
Col2a1P28481 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col2a1P28481 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col2a1P28481 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col2a1P28481 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col2a1P28481 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col2a1P28481 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col2a1P28481 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col2a1P28481 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Col2a1P28481 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col2a1P28481 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col2a1P28481 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
Col2a1P28481 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Col2a1P28481 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col2a1P28481 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Col2a1P28481 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col2a1P28481 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col2a1P28481 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col2a1P28481 Gm6677-201ENSMUST00000195100 441 ntBASIC12.92□□□□□ -0.34
Col2a1P28481 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC12.92□□□□□ -0.34
Col2a1P28481 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms