Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nfkb1P25799 Gm14942-201ENSMUST00000119642 336 ntBASIC11.9□□□□□ -0.5
Nfkb1P25799 Gm11244-201ENSMUST00000121243 237 ntBASIC11.9□□□□□ -0.5
Nfkb1P25799 Gm13182-201ENSMUST00000122241 312 ntBASIC11.9□□□□□ -0.5
Nfkb1P25799 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.9□□□□□ -0.5
Nfkb1P25799 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Nfkb1P25799 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nfkb1P25799 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Nfkb1P25799 Gm9358-201ENSMUST00000183067 927 ntBASIC11.9□□□□□ -0.5
Nfkb1P25799 Gm17877-201ENSMUST00000192578 814 ntBASIC11.9□□□□□ -0.5
Nfkb1P25799 Gm43371-201ENSMUST00000202838 1031 ntBASIC11.9□□□□□ -0.5
Nfkb1P25799 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.9□□□□□ -0.5
Nfkb1P25799 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nfkb1P25799 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nfkb1P25799 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nfkb1P25799 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.9□□□□□ -0.5
Nfkb1P25799 Gm5451-201ENSMUST00000080545 579 ntBASIC11.9□□□□□ -0.5
Nfkb1P25799 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Nfkb1P25799 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nfkb1P25799 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nfkb1P25799 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nfkb1P25799 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nfkb1P25799 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nfkb1P25799 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Nfkb1P25799 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nfkb1P25799 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Nfkb1P25799 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nfkb1P25799 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC11.9□□□□□ -0.5
Nfkb1P25799 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Nfkb1P25799 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Nfkb1P25799 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.9□□□□□ -0.51
Nfkb1P25799 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Nfkb1P25799 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nfkb1P25799 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nfkb1P25799 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nfkb1P25799 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nfkb1P25799 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.89□□□□□ -0.51
Nfkb1P25799 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nfkb1P25799 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Nfkb1P25799 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Nfkb1P25799 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Nfkb1P25799 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nfkb1P25799 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nfkb1P25799 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nfkb1P25799 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nfkb1P25799 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.89□□□□□ -0.51
Nfkb1P25799 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nfkb1P25799 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
Nfkb1P25799 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nfkb1P25799 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nfkb1P25799 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Nfkb1P25799 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.89□□□□□ -0.51
Nfkb1P25799 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nfkb1P25799 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.89□□□□□ -0.51
Nfkb1P25799 Mir1956-201ENSMUST00000157748 65 ntBASIC11.89□□□□□ -0.51
Nfkb1P25799 Gm18159-201ENSMUST00000174516 1070 ntBASIC11.89□□□□□ -0.51
Nfkb1P25799 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nfkb1P25799 Gm43830-201ENSMUST00000198760 1067 ntBASIC11.89□□□□□ -0.51
Nfkb1P25799 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.89□□□□□ -0.51
Nfkb1P25799 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.89□□□□□ -0.51
Nfkb1P25799 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Nfkb1P25799 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nfkb1P25799 Gm23105-201ENSMUST00000083719 134 ntBASIC11.89□□□□□ -0.51
Nfkb1P25799 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nfkb1P25799 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Nfkb1P25799 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nfkb1P25799 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nfkb1P25799 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nfkb1P25799 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nfkb1P25799 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nfkb1P25799 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nfkb1P25799 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.89□□□□□ -0.51
Nfkb1P25799 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nfkb1P25799 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nfkb1P25799 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Nfkb1P25799 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nfkb1P25799 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nfkb1P25799 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nfkb1P25799 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nfkb1P25799 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nfkb1P25799 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nfkb1P25799 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nfkb1P25799 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nfkb1P25799 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nfkb1P25799 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nfkb1P25799 Gm15615-201ENSMUST00000118876 198 ntBASIC11.88□□□□□ -0.51
Nfkb1P25799 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nfkb1P25799 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Nfkb1P25799 Mir6998-201ENSMUST00000183343 64 ntBASIC11.88□□□□□ -0.51
Nfkb1P25799 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.88□□□□□ -0.51
Nfkb1P25799 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nfkb1P25799 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.88□□□□□ -0.51
Nfkb1P25799 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC11.88□□□□□ -0.51
Nfkb1P25799 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nfkb1P25799 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nfkb1P25799 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nfkb1P25799 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC11.88□□□□□ -0.51
Nfkb1P25799 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC11.88□□□□□ -0.51
Nfkb1P25799 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.88□□□□□ -0.51
Nfkb1P25799 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms