Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Ablim1-212ENSMUST00000111558 3123 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Clk1P22518 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Clk1P22518 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Clk1P22518 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clk1P22518 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clk1P22518 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clk1P22518 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clk1P22518 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Clk1P22518 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Clk1P22518 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Clk1P22518 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clk1P22518 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clk1P22518 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Clk1P22518 Gm14565-201ENSMUST00000140021 2494 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Clk1P22518 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Clk1P22518 Gm8155-201ENSMUST00000216363 1612 ntBASIC10.87□□□□□ -0.67
Clk1P22518 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clk1P22518 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Clk1P22518 Itgad-201ENSMUST00000033051 3965 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clk1P22518 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Clk1P22518 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clk1P22518 Gm15953-201ENSMUST00000117656 1732 ntBASIC10.87□□□□□ -0.67
Clk1P22518 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Clk1P22518 Gm45336-201ENSMUST00000210010 3230 ntTSL 5 BASIC10.87□□□□□ -0.67
Clk1P22518 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Clk1P22518 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clk1P22518 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clk1P22518 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clk1P22518 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Clk1P22518 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.87□□□□□ -0.67
Clk1P22518 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clk1P22518 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.87□□□□□ -0.67
Clk1P22518 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC10.87□□□□□ -0.67
Clk1P22518 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.87□□□□□ -0.67
Clk1P22518 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Clk1P22518 Gm26083-201ENSMUST00000157904 193 ntBASIC10.87□□□□□ -0.67
Clk1P22518 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC10.87□□□□□ -0.67
Clk1P22518 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Clk1P22518 Gm6114-201ENSMUST00000182472 968 ntBASIC10.87□□□□□ -0.67
Clk1P22518 Gm8343-201ENSMUST00000182705 994 ntBASIC10.87□□□□□ -0.67
Clk1P22518 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Clk1P22518 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC10.87□□□□□ -0.67
Clk1P22518 Gm4607-201ENSMUST00000206649 577 ntBASIC10.87□□□□□ -0.67
Clk1P22518 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Clk1P22518 Gm17931-201ENSMUST00000208132 634 ntBASIC10.87□□□□□ -0.67
Clk1P22518 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Clk1P22518 Gm2553-201ENSMUST00000215986 605 ntBASIC10.87□□□□□ -0.67
Clk1P22518 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clk1P22518 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clk1P22518 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.87□□□□□ -0.67
Clk1P22518 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Clk1P22518 Dopey2-207ENSMUST00000227156 7340 ntBASIC10.87□□□□□ -0.67
Clk1P22518 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clk1P22518 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Clk1P22518 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clk1P22518 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clk1P22518 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clk1P22518 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clk1P22518 Gm45161-201ENSMUST00000207316 2263 ntBASIC10.87□□□□□ -0.67
Clk1P22518 Gm45165-201ENSMUST00000207763 1631 ntBASIC10.87□□□□□ -0.67
Clk1P22518 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.87□□□□□ -0.67
Clk1P22518 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clk1P22518 Gm42031-201ENSMUST00000209823 1885 ntTSL 5 BASIC10.87□□□□□ -0.67
Clk1P22518 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clk1P22518 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Clk1P22518 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clk1P22518 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Clk1P22518 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.87□□□□□ -0.67
Clk1P22518 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clk1P22518 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Clk1P22518 Gm26780-201ENSMUST00000180748 2495 ntTSL 5 BASIC10.86□□□□□ -0.67
Clk1P22518 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Clk1P22518 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clk1P22518 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Clk1P22518 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clk1P22518 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.86□□□□□ -0.67
Clk1P22518 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clk1P22518 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Clk1P22518 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.86□□□□□ -0.67
Clk1P22518 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clk1P22518 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clk1P22518 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clk1P22518 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clk1P22518 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Clk1P22518 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clk1P22518 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clk1P22518 Btk-202ENSMUST00000113213 2121 ntTSL 5 BASIC10.86□□□□□ -0.67
Clk1P22518 Gm12012-201ENSMUST00000118857 1066 ntBASIC10.86□□□□□ -0.67
Clk1P22518 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC10.86□□□□□ -0.67
Clk1P22518 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clk1P22518 Gm5616-201ENSMUST00000165252 384 ntBASIC10.86□□□□□ -0.67
Clk1P22518 Gm17376-201ENSMUST00000166016 84 ntBASIC10.86□□□□□ -0.67
Clk1P22518 Gm8741-201ENSMUST00000174736 384 ntBASIC10.86□□□□□ -0.67
Clk1P22518 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.86□□□□□ -0.67
Clk1P22518 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Clk1P22518 Gm27627-201ENSMUST00000183644 150 ntBASIC10.86□□□□□ -0.67
Clk1P22518 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC10.86□□□□□ -0.67
Clk1P22518 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC10.86□□□□□ -0.67
Clk1P22518 Gm43438-201ENSMUST00000198133 379 ntBASIC10.86□□□□□ -0.67
Clk1P22518 Gm19287-201ENSMUST00000203190 358 ntBASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms