Protein–RNA interactions for Protein: P20615

Hoxb9, Homeobox protein Hox-B9, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb9P20615 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxb9P20615 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxb9P20615 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxb9P20615 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxb9P20615 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxb9P20615 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.03□□□□□ -0.64
Hoxb9P20615 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxb9P20615 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxb9P20615 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxb9P20615 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxb9P20615 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxb9P20615 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxb9P20615 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxb9P20615 Gm18367-201ENSMUST00000176139 600 ntBASIC11.03□□□□□ -0.64
Hoxb9P20615 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.03□□□□□ -0.64
Hoxb9P20615 Gm37246-201ENSMUST00000192665 835 ntBASIC11.03□□□□□ -0.64
Hoxb9P20615 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.03□□□□□ -0.64
Hoxb9P20615 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.03□□□□□ -0.64
Hoxb9P20615 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.03□□□□□ -0.64
Hoxb9P20615 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxb9P20615 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.03□□□□□ -0.64
Hoxb9P20615 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Hoxb9P20615 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.03□□□□□ -0.64
Hoxb9P20615 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Hoxb9P20615 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxb9P20615 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxb9P20615 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxb9P20615 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Hoxb9P20615 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxb9P20615 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxb9P20615 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxb9P20615 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Hoxb9P20615 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Hoxb9P20615 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxb9P20615 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Hoxb9P20615 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.03□□□□□ -0.64
Hoxb9P20615 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.03□□□□□ -0.64
Hoxb9P20615 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxb9P20615 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxb9P20615 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Hoxb9P20615 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxb9P20615 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxb9P20615 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hoxb9P20615 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hoxb9P20615 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.02□□□□□ -0.64
Hoxb9P20615 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hoxb9P20615 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Hoxb9P20615 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hoxb9P20615 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Hoxb9P20615 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Hoxb9P20615 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hoxb9P20615 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hoxb9P20615 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxb9P20615 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Hoxb9P20615 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxb9P20615 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Hoxb9P20615 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxb9P20615 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Hoxb9P20615 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.02□□□□□ -0.65
Hoxb9P20615 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxb9P20615 Gm25148-201ENSMUST00000104611 123 ntBASIC11.02□□□□□ -0.65
Hoxb9P20615 Gm14193-201ENSMUST00000105067 153 ntBASIC11.02□□□□□ -0.65
Hoxb9P20615 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxb9P20615 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxb9P20615 Gm12247-201ENSMUST00000117585 670 ntBASIC11.02□□□□□ -0.65
Hoxb9P20615 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxb9P20615 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.02□□□□□ -0.65
Hoxb9P20615 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.02□□□□□ -0.65
Hoxb9P20615 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.02□□□□□ -0.65
Hoxb9P20615 Gm7504-201ENSMUST00000201449 424 ntBASIC11.02□□□□□ -0.65
Hoxb9P20615 Gm44506-201ENSMUST00000206278 965 ntBASIC11.02□□□□□ -0.65
Hoxb9P20615 Gm9445-201ENSMUST00000207454 1285 ntBASIC11.02□□□□□ -0.65
Hoxb9P20615 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxb9P20615 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxb9P20615 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.02□□□□□ -0.65
Hoxb9P20615 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.02□□□□□ -0.65
Hoxb9P20615 Gm1821-202ENSMUST00000227415 750 ntBASIC11.02□□□□□ -0.65
Hoxb9P20615 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxb9P20615 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.02□□□□□ -0.65
Hoxb9P20615 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxb9P20615 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Hoxb9P20615 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Hoxb9P20615 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxb9P20615 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxb9P20615 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxb9P20615 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxb9P20615 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxb9P20615 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxb9P20615 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxb9P20615 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxb9P20615 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.02□□□□□ -0.65
Hoxb9P20615 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxb9P20615 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxb9P20615 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxb9P20615 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxb9P20615 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxb9P20615 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.02□□□□□ -0.65
Hoxb9P20615 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxb9P20615 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Hoxb9P20615 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms