Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cxcl1P12850 AC207128.2-201ENSMUST00000223708 1924 ntBASIC9.53□□□□□ -0.88
Cxcl1P12850 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Cxcl1P12850 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Cxcl1P12850 Gm23270-201ENSMUST00000104055 131 ntBASIC9.53□□□□□ -0.88
Cxcl1P12850 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC9.53□□□□□ -0.88
Cxcl1P12850 Gm15370-201ENSMUST00000117158 253 ntBASIC9.53□□□□□ -0.88
Cxcl1P12850 Gm11222-201ENSMUST00000119005 738 ntBASIC9.53□□□□□ -0.88
Cxcl1P12850 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cxcl1P12850 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Cxcl1P12850 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cxcl1P12850 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC9.53□□□□□ -0.88
Cxcl1P12850 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Cxcl1P12850 Gm45691-201ENSMUST00000206905 1120 ntBASIC9.53□□□□□ -0.88
Cxcl1P12850 Gm7293-201ENSMUST00000216682 1007 ntBASIC9.53□□□□□ -0.88
Cxcl1P12850 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cxcl1P12850 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cxcl1P12850 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cxcl1P12850 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cxcl1P12850 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cxcl1P12850 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC9.53□□□□□ -0.88
Cxcl1P12850 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC9.53□□□□□ -0.88
Cxcl1P12850 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cxcl1P12850 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
Cxcl1P12850 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC9.53□□□□□ -0.88
Cxcl1P12850 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC9.53□□□□□ -0.88
Cxcl1P12850 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Cxcl1P12850 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Cxcl1P12850 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cxcl1P12850 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cxcl1P12850 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC9.53□□□□□ -0.88
Cxcl1P12850 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cxcl1P12850 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Cxcl1P12850 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC9.53□□□□□ -0.88
Cxcl1P12850 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cxcl1P12850 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Cxcl1P12850 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Cxcl1P12850 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Cxcl1P12850 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Cxcl1P12850 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Cxcl1P12850 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC9.52□□□□□ -0.88
Cxcl1P12850 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
Cxcl1P12850 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Cxcl1P12850 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC9.52□□□□□ -0.88
Cxcl1P12850 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC9.52□□□□□ -0.88
Cxcl1P12850 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
Cxcl1P12850 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Cxcl1P12850 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cxcl1P12850 Gm43321-201ENSMUST00000198897 2409 ntBASIC9.52□□□□□ -0.89
Cxcl1P12850 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Cxcl1P12850 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Cxcl1P12850 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cxcl1P12850 Dopey2-207ENSMUST00000227156 7340 ntBASIC9.52□□□□□ -0.89
Cxcl1P12850 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cxcl1P12850 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Cxcl1P12850 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cxcl1P12850 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cxcl1P12850 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC9.52□□□□□ -0.89
Cxcl1P12850 Gm11930-201ENSMUST00000117788 190 ntBASIC9.52□□□□□ -0.89
Cxcl1P12850 Gm11425-201ENSMUST00000119608 498 ntBASIC9.52□□□□□ -0.89
Cxcl1P12850 Gm12129-201ENSMUST00000120104 1147 ntBASIC9.52□□□□□ -0.89
Cxcl1P12850 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Cxcl1P12850 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Cxcl1P12850 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
Cxcl1P12850 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC9.52□□□□□ -0.89
Cxcl1P12850 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC9.52□□□□□ -0.89
Cxcl1P12850 Gm38114-201ENSMUST00000191877 1232 ntBASIC9.52□□□□□ -0.89
Cxcl1P12850 Olfr284-202ENSMUST00000206647 966 ntBASIC9.52□□□□□ -0.89
Cxcl1P12850 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC9.52□□□□□ -0.89
Cxcl1P12850 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC9.52□□□□□ -0.89
Cxcl1P12850 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cxcl1P12850 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cxcl1P12850 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cxcl1P12850 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cxcl1P12850 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cxcl1P12850 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cxcl1P12850 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Cxcl1P12850 Gm9396-201ENSMUST00000076703 567 ntBASIC9.52□□□□□ -0.89
Cxcl1P12850 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cxcl1P12850 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cxcl1P12850 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cxcl1P12850 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Cxcl1P12850 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Cxcl1P12850 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Cxcl1P12850 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cxcl1P12850 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cxcl1P12850 Gm44663-201ENSMUST00000206898 3150 ntBASIC9.52□□□□□ -0.89
Cxcl1P12850 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Cxcl1P12850 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cxcl1P12850 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC9.52□□□□□ -0.89
Cxcl1P12850 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cxcl1P12850 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Cxcl1P12850 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC9.52□□□□□ -0.89
Cxcl1P12850 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Cxcl1P12850 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cxcl1P12850 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cxcl1P12850 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Cxcl1P12850 Gm9544-201ENSMUST00000223349 2482 ntBASIC9.51□□□□□ -0.89
Cxcl1P12850 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cxcl1P12850 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms