Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col1a1P11087 Gm22344-201ENSMUST00000122642 278 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Col1a1P11087 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Col1a1P11087 Gm23647-201ENSMUST00000175042 109 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 Rn5s-201ENSMUST00000177555 119 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 n-R5s108-201ENSMUST00000177575 119 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 n-R5s121-201ENSMUST00000177589 119 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 n-R5s146-201ENSMUST00000177889 119 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 Gm22109-201ENSMUST00000177995 119 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 Gm22291-201ENSMUST00000178027 119 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 n-R5s141-201ENSMUST00000178066 119 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 Gm23284-201ENSMUST00000178069 119 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 n-R5s100-201ENSMUST00000178106 119 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 n-R5s111-201ENSMUST00000178203 119 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 n-R5s105-201ENSMUST00000178499 119 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 n-R5s149-201ENSMUST00000178520 119 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 n-R5s103-201ENSMUST00000178755 119 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 n-R5s123-201ENSMUST00000178804 119 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 n-R5s142-201ENSMUST00000178820 119 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 n-R5s144-201ENSMUST00000178859 119 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 n-R5s139-201ENSMUST00000178975 119 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 n-R5s134-201ENSMUST00000178983 119 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 n-R5s136-201ENSMUST00000179080 119 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 Gm25018-201ENSMUST00000179081 119 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 n-R5s104-201ENSMUST00000179107 119 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 n-R5s113-201ENSMUST00000179143 119 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 n-R5s133-201ENSMUST00000179275 119 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 n-R5s117-201ENSMUST00000179431 119 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 Gm25212-201ENSMUST00000179432 119 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 n-R5s138-201ENSMUST00000179476 119 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 n-R5s122-201ENSMUST00000179500 119 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 n-R5s143-201ENSMUST00000179542 119 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 n-R5s107-201ENSMUST00000179704 119 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 Gm26391-201ENSMUST00000179843 119 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 n-R5s110-201ENSMUST00000179995 119 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 n-R5s128-201ENSMUST00000180096 119 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 n-R5s124-201ENSMUST00000180334 119 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 Gm27440-201ENSMUST00000184785 107 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 Gm19927-201ENSMUST00000185792 781 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 Gm6644-201ENSMUST00000186507 951 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col1a1P11087 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC13.39□□□□□ -0.27
Col1a1P11087 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 AC129975.1-201ENSMUST00000224816 592 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col1a1P11087 Gm24089-201ENSMUST00000093696 109 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col1a1P11087 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col1a1P11087 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col1a1P11087 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC13.39□□□□□ -0.27
Col1a1P11087 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col1a1P11087 Gm44740-201ENSMUST00000205603 1614 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Col1a1P11087 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col1a1P11087 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col1a1P11087 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col1a1P11087 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col1a1P11087 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC13.39□□□□□ -0.27
Col1a1P11087 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col1a1P11087 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col1a1P11087 AC022682.1-201ENSMUST00000224624 2023 ntBASIC13.38□□□□□ -0.27
Col1a1P11087 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.38□□□□□ -0.27
Col1a1P11087 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col1a1P11087 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col1a1P11087 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col1a1P11087 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col1a1P11087 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col1a1P11087 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Col1a1P11087 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC13.38□□□□□ -0.27
Col1a1P11087 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Col1a1P11087 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Col1a1P11087 Gm24943-201ENSMUST00000158329 433 ntBASIC13.38□□□□□ -0.27
Col1a1P11087 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC13.38□□□□□ -0.27
Col1a1P11087 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col1a1P11087 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC13.38□□□□□ -0.27
Col1a1P11087 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC13.38□□□□□ -0.27
Col1a1P11087 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC13.38□□□□□ -0.27
Col1a1P11087 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Col1a1P11087 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col1a1P11087 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col1a1P11087 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col1a1P11087 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col1a1P11087 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col1a1P11087 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col1a1P11087 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col1a1P11087 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col1a1P11087 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC13.38□□□□□ -0.27
Col1a1P11087 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col1a1P11087 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col1a1P11087 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col1a1P11087 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col1a1P11087 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col1a1P11087 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col1a1P11087 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Col1a1P11087 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col1a1P11087 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
Col1a1P11087 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Col1a1P11087 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms