Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl3P10855 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl3P10855 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl3P10855 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl3P10855 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl3P10855 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl3P10855 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl3P10855 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC10.18□□□□□ -0.78
Ccl3P10855 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl3P10855 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
Ccl3P10855 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl3P10855 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl3P10855 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Ccl3P10855 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl3P10855 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl3P10855 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl3P10855 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl3P10855 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl3P10855 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl3P10855 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl3P10855 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.17□□□□□ -0.78
Ccl3P10855 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl3P10855 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl3P10855 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl3P10855 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC10.17□□□□□ -0.78
Ccl3P10855 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Ccl3P10855 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl3P10855 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl3P10855 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl3P10855 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl3P10855 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl3P10855 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC10.17□□□□□ -0.78
Ccl3P10855 Gm12453-201ENSMUST00000121981 331 ntBASIC10.17□□□□□ -0.78
Ccl3P10855 Gm15620-201ENSMUST00000122949 270 ntBASIC10.17□□□□□ -0.78
Ccl3P10855 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC10.17□□□□□ -0.78
Ccl3P10855 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC10.17□□□□□ -0.78
Ccl3P10855 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl3P10855 Mir6941-201ENSMUST00000184711 59 ntBASIC10.17□□□□□ -0.78
Ccl3P10855 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.17□□□□□ -0.78
Ccl3P10855 Gm9369-201ENSMUST00000196009 733 ntBASIC10.17□□□□□ -0.78
Ccl3P10855 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl3P10855 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Ccl3P10855 Gm7525-201ENSMUST00000219425 454 ntBASIC10.17□□□□□ -0.78
Ccl3P10855 CT030166.5-201ENSMUST00000222249 420 ntBASIC10.17□□□□□ -0.78
Ccl3P10855 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC10.17□□□□□ -0.78
Ccl3P10855 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl3P10855 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl3P10855 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl3P10855 Gm8181-201ENSMUST00000062242 669 ntBASIC10.17□□□□□ -0.78
Ccl3P10855 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Ccl3P10855 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl3P10855 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.17□□□□□ -0.78
Ccl3P10855 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Ccl3P10855 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl3P10855 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl3P10855 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl3P10855 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
Ccl3P10855 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl3P10855 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.17□□□□□ -0.78
Ccl3P10855 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl3P10855 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.17□□□□□ -0.78
Ccl3P10855 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl3P10855 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl3P10855 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl3P10855 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl3P10855 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Ccl3P10855 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Ccl3P10855 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl3P10855 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl3P10855 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Ccl3P10855 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Ccl3P10855 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl3P10855 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl3P10855 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.16□□□□□ -0.78
Ccl3P10855 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl3P10855 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl3P10855 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Ccl3P10855 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Ccl3P10855 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.16□□□□□ -0.78
Ccl3P10855 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl3P10855 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl3P10855 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl3P10855 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl3P10855 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl3P10855 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Ccl3P10855 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl3P10855 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
Ccl3P10855 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.78
Ccl3P10855 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl3P10855 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl3P10855 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl3P10855 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.16□□□□□ -0.78
Ccl3P10855 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl3P10855 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl3P10855 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl3P10855 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC10.16□□□□□ -0.78
Ccl3P10855 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC10.16□□□□□ -0.78
Ccl3P10855 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl3P10855 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl3P10855 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms