Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
PtcraP0C6B2 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PtcraP0C6B2 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
PtcraP0C6B2 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
PtcraP0C6B2 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.09□□□□□ -0.79
PtcraP0C6B2 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PtcraP0C6B2 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PtcraP0C6B2 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
PtcraP0C6B2 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PtcraP0C6B2 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
PtcraP0C6B2 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
PtcraP0C6B2 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PtcraP0C6B2 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
PtcraP0C6B2 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
PtcraP0C6B2 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PtcraP0C6B2 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
PtcraP0C6B2 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
PtcraP0C6B2 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
PtcraP0C6B2 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
PtcraP0C6B2 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
PtcraP0C6B2 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
PtcraP0C6B2 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PtcraP0C6B2 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PtcraP0C6B2 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.09□□□□□ -0.79
PtcraP0C6B2 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Gm12106-201ENSMUST00000116006 1200 ntBASIC10.08□□□□□ -0.8
PtcraP0C6B2 Gm12217-201ENSMUST00000118858 696 ntBASIC10.08□□□□□ -0.8
PtcraP0C6B2 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC10.08□□□□□ -0.8
PtcraP0C6B2 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Gm25732-201ENSMUST00000175168 60 ntBASIC10.08□□□□□ -0.8
PtcraP0C6B2 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Gm44008-201ENSMUST00000204345 412 ntBASIC10.08□□□□□ -0.8
PtcraP0C6B2 Gm45909-201ENSMUST00000212413 1031 ntBASIC10.08□□□□□ -0.8
PtcraP0C6B2 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC10.08□□□□□ -0.8
PtcraP0C6B2 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC10.08□□□□□ -0.8
PtcraP0C6B2 AC131330.1-201ENSMUST00000227814 1015 ntBASIC10.08□□□□□ -0.8
PtcraP0C6B2 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.08□□□□□ -0.8
PtcraP0C6B2 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PtcraP0C6B2 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PtcraP0C6B2 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Rgr-203ENSMUST00000225070 4704 ntBASIC10.08□□□□□ -0.8
PtcraP0C6B2 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PtcraP0C6B2 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PtcraP0C6B2 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
PtcraP0C6B2 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
PtcraP0C6B2 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC10.07□□□□□ -0.8
PtcraP0C6B2 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
PtcraP0C6B2 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.07□□□□□ -0.8
PtcraP0C6B2 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
PtcraP0C6B2 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
PtcraP0C6B2 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
PtcraP0C6B2 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
PtcraP0C6B2 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
PtcraP0C6B2 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.07□□□□□ -0.8
PtcraP0C6B2 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
PtcraP0C6B2 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
PtcraP0C6B2 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
PtcraP0C6B2 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms