Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc9P09633 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc9P09633 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC14.89□□□□□ -0.03
Hoxc9P09633 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Hoxc9P09633 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc9P09633 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc9P09633 AC157950.1-201ENSMUST00000217561 2168 ntBASIC14.88□□□□□ -0.03
Hoxc9P09633 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc9P09633 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc9P09633 Gm18210-201ENSMUST00000209001 1524 ntBASIC14.88□□□□□ -0.03
Hoxc9P09633 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Hoxc9P09633 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Hoxc9P09633 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Hoxc9P09633 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc9P09633 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc9P09633 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc9P09633 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc9P09633 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc9P09633 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC14.88□□□□□ -0.03
Hoxc9P09633 Gm35960-201ENSMUST00000202712 767 ntBASIC14.88□□□□□ -0.03
Hoxc9P09633 Gm43966-201ENSMUST00000203301 612 ntBASIC14.88□□□□□ -0.03
Hoxc9P09633 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc9P09633 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC14.88□□□□□ -0.03
Hoxc9P09633 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Hoxc9P09633 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
Hoxc9P09633 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc9P09633 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc9P09633 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC14.88□□□□□ -0.03
Hoxc9P09633 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc9P09633 Gm37651-201ENSMUST00000194679 1494 ntBASIC14.88□□□□□ -0.03
Hoxc9P09633 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.88□□□□□ -0.03
Hoxc9P09633 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc9P09633 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc9P09633 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Hoxc9P09633 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Hoxc9P09633 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC14.87□□□□□ -0.03
Hoxc9P09633 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC14.87□□□□□ -0.03
Hoxc9P09633 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc9P09633 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC14.87□□□□□ -0.03
Hoxc9P09633 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Hoxc9P09633 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc9P09633 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc9P09633 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Hoxc9P09633 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc9P09633 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc9P09633 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
Hoxc9P09633 Gm12948-201ENSMUST00000119406 682 ntBASIC14.87□□□□□ -0.03
Hoxc9P09633 Gm12712-201ENSMUST00000120676 801 ntBASIC14.87□□□□□ -0.03
Hoxc9P09633 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc9P09633 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Hoxc9P09633 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Hoxc9P09633 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc9P09633 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC14.87□□□□□ -0.03
Hoxc9P09633 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Hoxc9P09633 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc9P09633 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc9P09633 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Hoxc9P09633 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc9P09633 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc9P09633 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc9P09633 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc9P09633 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc9P09633 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Hoxc9P09633 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc9P09633 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC14.87□□□□□ -0.03
Hoxc9P09633 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Hoxc9P09633 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC14.86□□□□□ -0.03
Hoxc9P09633 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Hoxc9P09633 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc9P09633 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc9P09633 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc9P09633 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Hoxc9P09633 Gm37014-201ENSMUST00000194723 2253 ntBASIC14.86□□□□□ -0.03
Hoxc9P09633 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Hoxc9P09633 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc9P09633 Gm43152-201ENSMUST00000202495 1638 ntBASIC14.86□□□□□ -0.03
Hoxc9P09633 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc9P09633 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc9P09633 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc9P09633 Gm17221-201ENSMUST00000163909 481 ntBASIC14.86□□□□□ -0.03
Hoxc9P09633 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc9P09633 Gm17073-201ENSMUST00000168069 556 ntBASIC14.86□□□□□ -0.03
Hoxc9P09633 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC14.86□□□□□ -0.03
Hoxc9P09633 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC14.86□□□□□ -0.03
Hoxc9P09633 Gm37852-201ENSMUST00000193027 350 ntBASIC14.86□□□□□ -0.03
Hoxc9P09633 Gm6855-201ENSMUST00000206307 790 ntBASIC14.86□□□□□ -0.03
Hoxc9P09633 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC14.86□□□□□ -0.03
Hoxc9P09633 CT030166.5-201ENSMUST00000222249 420 ntBASIC14.86□□□□□ -0.03
Hoxc9P09633 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc9P09633 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Hoxc9P09633 Gm5434-202ENSMUST00000222384 1451 ntBASIC14.86□□□□□ -0.03
Hoxc9P09633 Gm5434-201ENSMUST00000071825 1451 ntBASIC14.86□□□□□ -0.03
Hoxc9P09633 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc9P09633 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc9P09633 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc9P09633 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc9P09633 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc9P09633 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Hoxc9P09633 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc9P09633 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms