Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 AC130477.1-201ENSMUST00000226982 420 ntBASIC13.63□□□□□ -0.23
Col3a1P08121 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Col3a1P08121 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col3a1P08121 Gm25580-201ENSMUST00000083409 327 ntBASIC13.63□□□□□ -0.23
Col3a1P08121 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col3a1P08121 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col3a1P08121 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col3a1P08121 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col3a1P08121 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col3a1P08121 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col3a1P08121 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Col3a1P08121 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col3a1P08121 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col3a1P08121 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col3a1P08121 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col3a1P08121 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col3a1P08121 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col3a1P08121 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col3a1P08121 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Col3a1P08121 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col3a1P08121 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC13.63□□□□□ -0.23
Col3a1P08121 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col3a1P08121 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col3a1P08121 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col3a1P08121 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col3a1P08121 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col3a1P08121 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col3a1P08121 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Col3a1P08121 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col3a1P08121 Gm37931-201ENSMUST00000194686 2866 ntBASIC13.62□□□□□ -0.23
Col3a1P08121 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Col3a1P08121 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col3a1P08121 AC126257.2-201ENSMUST00000215507 2300 ntBASIC13.62□□□□□ -0.23
Col3a1P08121 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.62□□□□□ -0.23
Col3a1P08121 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col3a1P08121 Gm5257-201ENSMUST00000121823 790 ntBASIC13.62□□□□□ -0.23
Col3a1P08121 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col3a1P08121 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC13.62□□□□□ -0.23
Col3a1P08121 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC13.62□□□□□ -0.23
Col3a1P08121 Gm44216-201ENSMUST00000203942 157 ntBASIC13.62□□□□□ -0.23
Col3a1P08121 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC13.62□□□□□ -0.23
Col3a1P08121 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col3a1P08121 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Col3a1P08121 Gm7589-201ENSMUST00000085631 534 ntBASIC13.62□□□□□ -0.23
Col3a1P08121 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Col3a1P08121 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col3a1P08121 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col3a1P08121 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col3a1P08121 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col3a1P08121 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Col3a1P08121 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col3a1P08121 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col3a1P08121 Gm5822-201ENSMUST00000161562 1378 ntBASIC13.62□□□□□ -0.23
Col3a1P08121 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col3a1P08121 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.62□□□□□ -0.23
Col3a1P08121 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col3a1P08121 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col3a1P08121 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Col3a1P08121 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Col3a1P08121 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col3a1P08121 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col3a1P08121 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Col3a1P08121 Gm14234-201ENSMUST00000119539 845 ntBASIC13.61□□□□□ -0.23
Col3a1P08121 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Col3a1P08121 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col3a1P08121 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Col3a1P08121 Gm8451-201ENSMUST00000170338 447 ntBASIC13.61□□□□□ -0.23
Col3a1P08121 Gm18201-201ENSMUST00000174735 875 ntBASIC13.61□□□□□ -0.23
Col3a1P08121 Gm19927-201ENSMUST00000185792 781 ntBASIC13.61□□□□□ -0.23
Col3a1P08121 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col3a1P08121 Gm6390-201ENSMUST00000215034 589 ntBASIC13.61□□□□□ -0.23
Col3a1P08121 Gm7536-201ENSMUST00000077389 444 ntBASIC13.61□□□□□ -0.23
Col3a1P08121 Gm5453-201ENSMUST00000080866 447 ntBASIC13.61□□□□□ -0.23
Col3a1P08121 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col3a1P08121 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Col3a1P08121 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC13.61□□□□□ -0.23
Col3a1P08121 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col3a1P08121 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Col3a1P08121 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col3a1P08121 Gm42815-201ENSMUST00000198787 1470 ntBASIC13.61□□□□□ -0.23
Col3a1P08121 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col3a1P08121 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col3a1P08121 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col3a1P08121 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col3a1P08121 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col3a1P08121 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Col3a1P08121 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col3a1P08121 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col3a1P08121 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col3a1P08121 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col3a1P08121 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col3a1P08121 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.61□□□□□ -0.23
Col3a1P08121 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col3a1P08121 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col3a1P08121 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC13.61□□□□□ -0.23
Col3a1P08121 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col3a1P08121 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col3a1P08121 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col3a1P08121 Gm24791-201ENSMUST00000104284 131 ntBASIC13.61□□□□□ -0.23
Col3a1P08121 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms