Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.38□□□□□ -0.59
Hoxa4P06798 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxa4P06798 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxa4P06798 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa4P06798 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa4P06798 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa4P06798 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.37□□□□□ -0.59
Hoxa4P06798 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Hoxa4P06798 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa4P06798 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.37□□□□□ -0.59
Hoxa4P06798 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa4P06798 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa4P06798 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa4P06798 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa4P06798 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa4P06798 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa4P06798 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa4P06798 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.37□□□□□ -0.59
Hoxa4P06798 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Hoxa4P06798 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa4P06798 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
Hoxa4P06798 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Hoxa4P06798 Gm14740-201ENSMUST00000118538 1150 ntBASIC11.37□□□□□ -0.59
Hoxa4P06798 Gm12616-201ENSMUST00000118594 382 ntBASIC11.37□□□□□ -0.59
Hoxa4P06798 Gm8302-201ENSMUST00000119217 852 ntBASIC11.37□□□□□ -0.59
Hoxa4P06798 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.37□□□□□ -0.59
Hoxa4P06798 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa4P06798 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa4P06798 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.37□□□□□ -0.59
Hoxa4P06798 Gm12624-201ENSMUST00000177615 382 ntBASIC11.37□□□□□ -0.59
Hoxa4P06798 Gm12621-201ENSMUST00000177760 382 ntBASIC11.37□□□□□ -0.59
Hoxa4P06798 Gm12615-201ENSMUST00000177970 382 ntBASIC11.37□□□□□ -0.59
Hoxa4P06798 Gm12622-201ENSMUST00000177975 382 ntBASIC11.37□□□□□ -0.59
Hoxa4P06798 Gm12627-201ENSMUST00000178412 382 ntBASIC11.37□□□□□ -0.59
Hoxa4P06798 Gm12625-201ENSMUST00000179122 382 ntBASIC11.37□□□□□ -0.59
Hoxa4P06798 Gm12614-201ENSMUST00000179586 382 ntBASIC11.37□□□□□ -0.59
Hoxa4P06798 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa4P06798 Gm12613-201ENSMUST00000180323 382 ntBASIC11.37□□□□□ -0.59
Hoxa4P06798 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa4P06798 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.37□□□□□ -0.59
Hoxa4P06798 Gm44315-201ENSMUST00000203041 219 ntBASIC11.37□□□□□ -0.59
Hoxa4P06798 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.37□□□□□ -0.59
Hoxa4P06798 Gm6722-201ENSMUST00000221586 390 ntBASIC11.37□□□□□ -0.59
Hoxa4P06798 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.37□□□□□ -0.59
Hoxa4P06798 AC154257.1-202ENSMUST00000224729 843 ntBASIC11.37□□□□□ -0.59
Hoxa4P06798 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa4P06798 Gm10702-201ENSMUST00000098929 1268 ntBASIC11.37□□□□□ -0.59
Hoxa4P06798 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa4P06798 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa4P06798 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.37□□□□□ -0.59
Hoxa4P06798 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa4P06798 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Hoxa4P06798 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.37□□□□□ -0.59
Hoxa4P06798 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.37□□□□□ -0.59
Hoxa4P06798 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa4P06798 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa4P06798 Gm5124-202ENSMUST00000132683 2083 ntBASIC11.37□□□□□ -0.59
Hoxa4P06798 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa4P06798 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa4P06798 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Hoxa4P06798 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa4P06798 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
Hoxa4P06798 Btrc-209ENSMUST00000224478 2194 ntBASIC11.37□□□□□ -0.59
Hoxa4P06798 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Hoxa4P06798 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa4P06798 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa4P06798 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa4P06798 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.37□□□□□ -0.59
Hoxa4P06798 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Hoxa4P06798 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa4P06798 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.36□□□□□ -0.59
Hoxa4P06798 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.36□□□□□ -0.59
Hoxa4P06798 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa4P06798 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.36□□□□□ -0.59
Hoxa4P06798 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa4P06798 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa4P06798 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.36□□□□□ -0.59
Hoxa4P06798 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa4P06798 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Hoxa4P06798 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.36□□□□□ -0.59
Hoxa4P06798 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
Hoxa4P06798 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa4P06798 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa4P06798 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa4P06798 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa4P06798 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa4P06798 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa4P06798 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Hoxa4P06798 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa4P06798 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa4P06798 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.36□□□□□ -0.59
Hoxa4P06798 Gm22902-201ENSMUST00000158488 302 ntBASIC11.36□□□□□ -0.59
Hoxa4P06798 Olfml3-204ENSMUST00000169286 874 ntBASIC11.36□□□□□ -0.59
Hoxa4P06798 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC11.36□□□□□ -0.59
Hoxa4P06798 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC11.36□□□□□ -0.59
Hoxa4P06798 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.36□□□□□ -0.59
Hoxa4P06798 Gm37284-201ENSMUST00000193607 539 ntBASIC11.36□□□□□ -0.59
Hoxa4P06798 Gm37299-201ENSMUST00000193951 826 ntBASIC11.36□□□□□ -0.59
Hoxa4P06798 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.36□□□□□ -0.59
Hoxa4P06798 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms