Protein–RNA interactions for Protein: P01878

Ig alpha chain C region, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01878 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC11.82□□□□□ -0.52
P01878 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01878 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01878 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01878 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
P01878 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01878 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01878 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.82□□□□□ -0.52
P01878 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01878 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01878 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01878 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01878 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01878 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.82□□□□□ -0.52
P01878 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01878 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01878 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01878 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.81□□□□□ -0.52
P01878 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01878 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P01878 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01878 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01878 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P01878 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
P01878 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01878 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01878 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01878 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01878 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01878 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
P01878 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
P01878 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01878 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01878 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01878 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
P01878 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01878 Gm11619-201ENSMUST00000117474 237 ntBASIC11.81□□□□□ -0.52
P01878 Gm11578-201ENSMUST00000118530 459 ntBASIC11.81□□□□□ -0.52
P01878 Gm24328-201ENSMUST00000175104 67 ntBASIC11.81□□□□□ -0.52
P01878 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
P01878 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
P01878 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
P01878 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
P01878 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC11.81□□□□□ -0.52
P01878 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
P01878 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
P01878 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
P01878 Gm19013-201ENSMUST00000183895 1222 ntBASIC11.81□□□□□ -0.52
P01878 Mrip-ps-201ENSMUST00000184613 940 ntBASIC11.81□□□□□ -0.52
P01878 Gm19014-201ENSMUST00000184828 1189 ntBASIC11.81□□□□□ -0.52
P01878 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC11.81□□□□□ -0.52
P01878 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC11.81□□□□□ -0.52
P01878 Gm44814-201ENSMUST00000207018 434 ntBASIC11.81□□□□□ -0.52
P01878 Gm2594-201ENSMUST00000214774 742 ntBASIC11.81□□□□□ -0.52
P01878 Gm9487-201ENSMUST00000216600 472 ntBASIC11.81□□□□□ -0.52
P01878 AC159376.1-201ENSMUST00000218504 630 ntBASIC11.81□□□□□ -0.52
P01878 AC115304.2-201ENSMUST00000226399 332 ntBASIC11.81□□□□□ -0.52
P01878 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01878 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P01878 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
P01878 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01878 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P01878 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01878 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
P01878 Gm37651-201ENSMUST00000194679 1494 ntBASIC11.81□□□□□ -0.52
P01878 Smok4a-201ENSMUST00000074512 1455 ntBASIC11.81□□□□□ -0.52
P01878 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P01878 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P01878 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01878 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P01878 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01878 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
P01878 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P01878 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
P01878 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
P01878 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01878 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01878 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
P01878 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
P01878 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01878 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01878 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01878 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
P01878 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
P01878 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01878 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01878 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01878 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01878 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC11.8□□□□□ -0.52
P01878 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01878 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01878 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.8□□□□□ -0.52
P01878 Gm43152-201ENSMUST00000202495 1638 ntBASIC11.8□□□□□ -0.52
P01878 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
P01878 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
P01878 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
P01878 Gm14165-201ENSMUST00000121456 952 ntBASIC11.8□□□□□ -0.52
P01878 Gm5257-201ENSMUST00000121823 790 ntBASIC11.8□□□□□ -0.52
P01878 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC11.8□□□□□ -0.52
P01878 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms