Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
P01852 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
P01852 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01852 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01852 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01852 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01852 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
P01852 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.59□□□□□ -0.71
P01852 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
P01852 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01852 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01852 Gm11783-201ENSMUST00000119549 885 ntBASIC10.59□□□□□ -0.71
P01852 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
P01852 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
P01852 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.59□□□□□ -0.71
P01852 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC10.59□□□□□ -0.71
P01852 Gm19353-201ENSMUST00000184561 445 ntBASIC10.59□□□□□ -0.71
P01852 Gm10774-201ENSMUST00000188689 204 ntBASIC10.59□□□□□ -0.71
P01852 Gm37246-201ENSMUST00000192665 835 ntBASIC10.59□□□□□ -0.71
P01852 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.59□□□□□ -0.71
P01852 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC10.59□□□□□ -0.71
P01852 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.59□□□□□ -0.71
P01852 Gm6108-201ENSMUST00000208365 367 ntBASIC10.59□□□□□ -0.71
P01852 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
P01852 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC10.59□□□□□ -0.71
P01852 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01852 Gm9785-201ENSMUST00000062642 1006 ntBASIC10.59□□□□□ -0.71
P01852 Ginm1-202ENSMUST00000065124 300 ntBASIC10.59□□□□□ -0.71
P01852 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01852 Gm17230-201ENSMUST00000171194 3942 ntBASIC10.59□□□□□ -0.71
P01852 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01852 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01852 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
P01852 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
P01852 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
P01852 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01852 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC10.59□□□□□ -0.71
P01852 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
P01852 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
P01852 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
P01852 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01852 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
P01852 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
P01852 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01852 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
P01852 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01852 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.71
P01852 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC10.58□□□□□ -0.72
P01852 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.58□□□□□ -0.72
P01852 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.58□□□□□ -0.72
P01852 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P01852 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P01852 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.58□□□□□ -0.72
P01852 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01852 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01852 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P01852 Gm10652-201ENSMUST00000199790 2622 ntBASIC10.58□□□□□ -0.72
P01852 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P01852 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
P01852 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.58□□□□□ -0.72
P01852 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01852 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.58□□□□□ -0.72
P01852 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
P01852 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01852 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01852 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P01852 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
P01852 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
P01852 Gm12579-201ENSMUST00000118040 783 ntBASIC10.58□□□□□ -0.72
P01852 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
P01852 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC10.58□□□□□ -0.72
P01852 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01852 Gm23699-201ENSMUST00000158835 135 ntBASIC10.58□□□□□ -0.72
P01852 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.58□□□□□ -0.72
P01852 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.58□□□□□ -0.72
P01852 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
P01852 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.58□□□□□ -0.72
P01852 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC10.58□□□□□ -0.72
P01852 Gm9555-201ENSMUST00000200908 583 ntBASIC10.58□□□□□ -0.72
P01852 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC10.58□□□□□ -0.72
P01852 Gm45113-201ENSMUST00000207518 165 ntBASIC10.58□□□□□ -0.72
P01852 Gm18393-201ENSMUST00000208349 1131 ntBASIC10.58□□□□□ -0.72
P01852 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01852 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC10.58□□□□□ -0.72
P01852 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P01852 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
P01852 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.58□□□□□ -0.72
P01852 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01852 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01852 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01852 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.58□□□□□ -0.72
P01852 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
P01852 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P01852 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01852 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.58□□□□□ -0.72
P01852 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
P01852 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01852 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
P01852 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01852 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms