Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC8.42□□□□□ -1.06
TcraP01849 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC8.42□□□□□ -1.06
TcraP01849 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC8.42□□□□□ -1.06
TcraP01849 AC126253.1-202ENSMUST00000226732 835 ntBASIC8.42□□□□□ -1.06
TcraP01849 AC108416.1-202ENSMUST00000228927 1201 ntBASIC8.42□□□□□ -1.06
TcraP01849 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
TcraP01849 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
TcraP01849 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
TcraP01849 Gm10268-201ENSMUST00000085340 555 ntBASIC8.42□□□□□ -1.06
TcraP01849 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
TcraP01849 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC8.42□□□□□ -1.06
TcraP01849 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
TcraP01849 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC8.42□□□□□ -1.06
TcraP01849 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
TcraP01849 Gm38089-201ENSMUST00000193585 1514 ntBASIC8.42□□□□□ -1.06
TcraP01849 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
TcraP01849 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
TcraP01849 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC8.42□□□□□ -1.06
TcraP01849 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
TcraP01849 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
TcraP01849 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
TcraP01849 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
TcraP01849 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
TcraP01849 Kalrn-203ENSMUST00000114947 2922 ntTSL 5 BASIC8.42□□□□□ -1.06
TcraP01849 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
TcraP01849 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
TcraP01849 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
TcraP01849 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
TcraP01849 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
TcraP01849 Ap2b1-201ENSMUST00000018875 5625 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
TcraP01849 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC8.42□□□□□ -1.06
TcraP01849 Olfr1219-204ENSMUST00000215225 5865 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
TcraP01849 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
TcraP01849 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TcraP01849 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC8.41□□□□□ -1.06
TcraP01849 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
TcraP01849 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TcraP01849 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
TcraP01849 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
TcraP01849 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
TcraP01849 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TcraP01849 Gm6092-201ENSMUST00000121659 2029 ntBASIC8.41□□□□□ -1.06
TcraP01849 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
TcraP01849 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
TcraP01849 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
TcraP01849 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
TcraP01849 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC8.41□□□□□ -1.06
TcraP01849 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
TcraP01849 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TcraP01849 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC8.41□□□□□ -1.06
TcraP01849 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TcraP01849 Il9r-205ENSMUST00000145401 4482 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
TcraP01849 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TcraP01849 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
TcraP01849 Zscan30-202ENSMUST00000224144 1458 ntBASIC8.41□□□□□ -1.06
TcraP01849 Gm12363-201ENSMUST00000122250 668 ntBASIC8.41□□□□□ -1.06
TcraP01849 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
TcraP01849 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
TcraP01849 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC8.41□□□□□ -1.06
TcraP01849 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC8.41□□□□□ -1.06
TcraP01849 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC8.41□□□□□ -1.06
TcraP01849 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
TcraP01849 Gm2639-201ENSMUST00000156881 1297 ntBASIC8.41□□□□□ -1.06
TcraP01849 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC8.41□□□□□ -1.06
TcraP01849 Gm43818-201ENSMUST00000200605 466 ntBASIC8.41□□□□□ -1.06
TcraP01849 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
TcraP01849 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC8.41□□□□□ -1.06
TcraP01849 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC8.41□□□□□ -1.06
TcraP01849 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
TcraP01849 AC069562.3-201ENSMUST00000225387 587 ntBASIC8.41□□□□□ -1.06
TcraP01849 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TcraP01849 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TcraP01849 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TcraP01849 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
TcraP01849 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TcraP01849 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC8.41□□□□□ -1.06
TcraP01849 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
TcraP01849 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
TcraP01849 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
TcraP01849 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TcraP01849 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TcraP01849 Ar-201ENSMUST00000052837 10048 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TcraP01849 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
TcraP01849 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
TcraP01849 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC8.41□□□□□ -1.06
TcraP01849 Rassf9-202ENSMUST00000219445 5294 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TcraP01849 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TcraP01849 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TcraP01849 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC8.41□□□□□ -1.06
TcraP01849 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
TcraP01849 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
TcraP01849 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
TcraP01849 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
TcraP01849 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
TcraP01849 Gm43999-201ENSMUST00000204286 2889 ntBASIC8.4□□□□□ -1.06
TcraP01849 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
TcraP01849 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
TcraP01849 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
TcraP01849 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
TcraP01849 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms