Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gm17826-201ENSMUST00000189720 798 ntBASIC12.5□□□□□ -0.41
Vti1aO89116 Gm37028-201ENSMUST00000194276 107 ntBASIC12.5□□□□□ -0.41
Vti1aO89116 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.5□□□□□ -0.41
Vti1aO89116 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.5□□□□□ -0.41
Vti1aO89116 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.5□□□□□ -0.41
Vti1aO89116 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.5□□□□□ -0.41
Vti1aO89116 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vti1aO89116 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vti1aO89116 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Vti1aO89116 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vti1aO89116 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Vti1aO89116 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.5□□□□□ -0.41
Vti1aO89116 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vti1aO89116 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.5□□□□□ -0.41
Vti1aO89116 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Vti1aO89116 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.5□□□□□ -0.41
Vti1aO89116 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vti1aO89116 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vti1aO89116 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vti1aO89116 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Vti1aO89116 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vti1aO89116 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Vti1aO89116 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Vti1aO89116 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.49□□□□□ -0.41
Vti1aO89116 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vti1aO89116 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.49□□□□□ -0.41
Vti1aO89116 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vti1aO89116 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vti1aO89116 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vti1aO89116 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vti1aO89116 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vti1aO89116 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vti1aO89116 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.49□□□□□ -0.41
Vti1aO89116 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vti1aO89116 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.49□□□□□ -0.41
Vti1aO89116 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vti1aO89116 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Vti1aO89116 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vti1aO89116 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.49□□□□□ -0.41
Vti1aO89116 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vti1aO89116 Selenot-ps-201ENSMUST00000119098 593 ntBASIC12.49□□□□□ -0.41
Vti1aO89116 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC12.49□□□□□ -0.41
Vti1aO89116 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.49□□□□□ -0.41
Vti1aO89116 Gm4879-201ENSMUST00000122190 1272 ntBASIC12.49□□□□□ -0.41
Vti1aO89116 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC12.49□□□□□ -0.41
Vti1aO89116 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vti1aO89116 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vti1aO89116 Mir8115-201ENSMUST00000184992 119 ntBASIC12.49□□□□□ -0.41
Vti1aO89116 Gm38117-201ENSMUST00000194653 939 ntBASIC12.49□□□□□ -0.41
Vti1aO89116 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vti1aO89116 Gm44329-201ENSMUST00000197469 112 ntBASIC12.49□□□□□ -0.41
Vti1aO89116 Gm3793-201ENSMUST00000204973 672 ntBASIC12.49□□□□□ -0.41
Vti1aO89116 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC12.49□□□□□ -0.41
Vti1aO89116 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.49□□□□□ -0.41
Vti1aO89116 Gm3028-201ENSMUST00000213805 1119 ntBASIC12.49□□□□□ -0.41
Vti1aO89116 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.49□□□□□ -0.41
Vti1aO89116 AC099645.1-201ENSMUST00000226476 1105 ntBASIC12.49□□□□□ -0.41
Vti1aO89116 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vti1aO89116 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vti1aO89116 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vti1aO89116 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Vti1aO89116 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Vti1aO89116 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vti1aO89116 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.49□□□□□ -0.41
Vti1aO89116 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vti1aO89116 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vti1aO89116 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vti1aO89116 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vti1aO89116 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vti1aO89116 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Vti1aO89116 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.49□□□□□ -0.41
Vti1aO89116 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vti1aO89116 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.49□□□□□ -0.41
Vti1aO89116 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vti1aO89116 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Vti1aO89116 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vti1aO89116 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.48□□□□□ -0.41
Vti1aO89116 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vti1aO89116 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vti1aO89116 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vti1aO89116 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.48□□□□□ -0.41
Vti1aO89116 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Vti1aO89116 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vti1aO89116 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vti1aO89116 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Vti1aO89116 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Vti1aO89116 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vti1aO89116 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.48□□□□□ -0.41
Vti1aO89116 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC12.48□□□□□ -0.41
Vti1aO89116 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vti1aO89116 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vti1aO89116 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Vti1aO89116 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.48□□□□□ -0.41
Vti1aO89116 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC12.48□□□□□ -0.41
Vti1aO89116 Gm6867-201ENSMUST00000219165 425 ntBASIC12.48□□□□□ -0.41
Vti1aO89116 AC166341.2-201ENSMUST00000220571 120 ntBASIC12.48□□□□□ -0.41
Vti1aO89116 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vti1aO89116 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vti1aO89116 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.48□□□□□ -0.41
Vti1aO89116 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms