Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf3O08791 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf3O08791 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Ebf3O08791 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf3O08791 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf3O08791 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Ebf3O08791 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ebf3O08791 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf3O08791 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.03□□□□□ -0.48
Ebf3O08791 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf3O08791 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Ebf3O08791 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ebf3O08791 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ebf3O08791 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf3O08791 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.03□□□□□ -0.48
Ebf3O08791 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf3O08791 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC12.03□□□□□ -0.48
Ebf3O08791 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Ebf3O08791 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf3O08791 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.03□□□□□ -0.48
Ebf3O08791 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.03□□□□□ -0.48
Ebf3O08791 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf3O08791 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.03□□□□□ -0.48
Ebf3O08791 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.03□□□□□ -0.48
Ebf3O08791 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf3O08791 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf3O08791 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf3O08791 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf3O08791 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf3O08791 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf3O08791 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.03□□□□□ -0.48
Ebf3O08791 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf3O08791 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf3O08791 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf3O08791 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf3O08791 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf3O08791 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf3O08791 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf3O08791 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Ebf3O08791 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ebf3O08791 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Ebf3O08791 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.02□□□□□ -0.48
Ebf3O08791 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ebf3O08791 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Ebf3O08791 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Ebf3O08791 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ebf3O08791 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ebf3O08791 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ebf3O08791 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Ebf3O08791 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Ebf3O08791 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ebf3O08791 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ebf3O08791 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Ebf3O08791 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ebf3O08791 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ebf3O08791 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ebf3O08791 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf3O08791 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Ebf3O08791 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Ebf3O08791 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Ebf3O08791 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf3O08791 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf3O08791 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf3O08791 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Ebf3O08791 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf3O08791 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.02□□□□□ -0.49
Ebf3O08791 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf3O08791 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf3O08791 Gm11783-201ENSMUST00000119549 885 ntBASIC12.02□□□□□ -0.49
Ebf3O08791 Gm7150-201ENSMUST00000122032 981 ntBASIC12.02□□□□□ -0.49
Ebf3O08791 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf3O08791 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC12.02□□□□□ -0.49
Ebf3O08791 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf3O08791 Gm3671-201ENSMUST00000182463 1007 ntBASIC12.02□□□□□ -0.49
Ebf3O08791 Gm37458-201ENSMUST00000194055 410 ntBASIC12.02□□□□□ -0.49
Ebf3O08791 Gm38151-201ENSMUST00000195085 289 ntBASIC12.02□□□□□ -0.49
Ebf3O08791 Gm19166-201ENSMUST00000196041 1063 ntBASIC12.02□□□□□ -0.49
Ebf3O08791 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf3O08791 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC12.02□□□□□ -0.49
Ebf3O08791 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.02□□□□□ -0.49
Ebf3O08791 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Ebf3O08791 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf3O08791 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf3O08791 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf3O08791 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf3O08791 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC12.02□□□□□ -0.49
Ebf3O08791 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf3O08791 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf3O08791 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf3O08791 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Ebf3O08791 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf3O08791 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf3O08791 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf3O08791 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf3O08791 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf3O08791 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf3O08791 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.02□□□□□ -0.49
Ebf3O08791 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf3O08791 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Ebf3O08791 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms