Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Btrc-209ENSMUST00000224478 2194 ntBASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Gm8566-201ENSMUST00000120174 465 ntBASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Gm8815-201ENSMUST00000173809 620 ntBASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Gm27530-201ENSMUST00000184096 98 ntBASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Gm5714-201ENSMUST00000197343 566 ntBASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf11bO08712 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Gm38151-201ENSMUST00000195085 289 ntBASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Gm6867-201ENSMUST00000219165 425 ntBASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Gm4978-201ENSMUST00000071565 801 ntBASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms