Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Shisa8J3QNX5 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Shisa8J3QNX5 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC10.5□□□□□ -0.73
Shisa8J3QNX5 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Shisa8J3QNX5 Gm12329-201ENSMUST00000120829 1007 ntBASIC10.5□□□□□ -0.73
Shisa8J3QNX5 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Shisa8J3QNX5 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Shisa8J3QNX5 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Shisa8J3QNX5 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC10.5□□□□□ -0.73
Shisa8J3QNX5 Gm8602-201ENSMUST00000184045 607 ntBASIC10.5□□□□□ -0.73
Shisa8J3QNX5 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Shisa8J3QNX5 Gm4607-201ENSMUST00000206649 577 ntBASIC10.5□□□□□ -0.73
Shisa8J3QNX5 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC10.5□□□□□ -0.73
Shisa8J3QNX5 Gm17823-201ENSMUST00000217830 1006 ntBASIC10.5□□□□□ -0.73
Shisa8J3QNX5 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Shisa8J3QNX5 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Shisa8J3QNX5 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.5□□□□□ -0.73
Shisa8J3QNX5 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.5□□□□□ -0.73
Shisa8J3QNX5 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Shisa8J3QNX5 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC10.5□□□□□ -0.73
Shisa8J3QNX5 AC114008.2-201ENSMUST00000227699 1347 ntBASIC10.5□□□□□ -0.73
Shisa8J3QNX5 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Shisa8J3QNX5 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Shisa8J3QNX5 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Shisa8J3QNX5 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Shisa8J3QNX5 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Shisa8J3QNX5 AC122273.1-201ENSMUST00000213634 2327 ntBASIC10.5□□□□□ -0.73
Shisa8J3QNX5 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC10.5□□□□□ -0.73
Shisa8J3QNX5 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Shisa8J3QNX5 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Gm44369-201ENSMUST00000204543 2175 ntBASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Gm23931-201ENSMUST00000103842 109 ntBASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Gm17150-201ENSMUST00000165577 381 ntBASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Gm6439-201ENSMUST00000199849 862 ntBASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Gm19287-201ENSMUST00000203190 358 ntBASIC10.49□□□□□ -0.73
Shisa8J3QNX5 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Gm8712-201ENSMUST00000221090 701 ntBASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Gm6203-201ENSMUST00000209575 1342 ntBASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Gm45828-201ENSMUST00000206938 1836 ntBASIC10.49□□□□□ -0.73
Shisa8J3QNX5 AC129336.2-201ENSMUST00000218053 3086 ntBASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Shisa8J3QNX5 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Shisa8J3QNX5 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Shisa8J3QNX5 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Shisa8J3QNX5 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Shisa8J3QNX5 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Shisa8J3QNX5 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Shisa8J3QNX5 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Shisa8J3QNX5 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Shisa8J3QNX5 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Shisa8J3QNX5 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Shisa8J3QNX5 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Shisa8J3QNX5 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Shisa8J3QNX5 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms