Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc180J3QNE4 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc180J3QNE4 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc180J3QNE4 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc180J3QNE4 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Ccdc180J3QNE4 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC20.79■□□□□ 0.92
Ccdc180J3QNE4 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc180J3QNE4 AC102847.1-202ENSMUST00000226313 1245 ntBASIC20.79■□□□□ 0.92
Ccdc180J3QNE4 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc180J3QNE4 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc180J3QNE4 Gm42941-201ENSMUST00000200347 1321 ntBASIC20.79■□□□□ 0.92
Ccdc180J3QNE4 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc180J3QNE4 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc180J3QNE4 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc180J3QNE4 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC20.79■□□□□ 0.92
Ccdc180J3QNE4 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc180J3QNE4 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc180J3QNE4 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc180J3QNE4 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc180J3QNE4 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Ccdc180J3QNE4 Gm5740-201ENSMUST00000211003 1857 ntBASIC20.78■□□□□ 0.92
Ccdc180J3QNE4 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Ccdc180J3QNE4 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc180J3QNE4 Gm5529-201ENSMUST00000165691 891 ntBASIC20.78■□□□□ 0.92
Ccdc180J3QNE4 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Ccdc180J3QNE4 Gm37365-201ENSMUST00000193109 409 ntBASIC20.78■□□□□ 0.92
Ccdc180J3QNE4 Gm42732-201ENSMUST00000202887 1197 ntBASIC20.78■□□□□ 0.92
Ccdc180J3QNE4 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc180J3QNE4 Gm6331-201ENSMUST00000217890 450 ntBASIC20.78■□□□□ 0.92
Ccdc180J3QNE4 BC106175-202ENSMUST00000219344 1213 ntBASIC20.78■□□□□ 0.92
Ccdc180J3QNE4 AC169511.1-201ENSMUST00000227639 995 ntBASIC20.78■□□□□ 0.92
Ccdc180J3QNE4 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc180J3QNE4 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc180J3QNE4 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Ccdc180J3QNE4 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Ccdc180J3QNE4 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC20.78■□□□□ 0.92
Ccdc180J3QNE4 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC20.78■□□□□ 0.92
Ccdc180J3QNE4 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Ccdc180J3QNE4 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc180J3QNE4 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc180J3QNE4 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc180J3QNE4 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc180J3QNE4 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc180J3QNE4 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC20.77■□□□□ 0.92
Ccdc180J3QNE4 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Ccdc180J3QNE4 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc180J3QNE4 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc180J3QNE4 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC20.77■□□□□ 0.92
Ccdc180J3QNE4 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC20.77■□□□□ 0.92
Ccdc180J3QNE4 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC20.77■□□□□ 0.92
Ccdc180J3QNE4 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC20.77■□□□□ 0.92
Ccdc180J3QNE4 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC20.77■□□□□ 0.92
Ccdc180J3QNE4 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC20.77■□□□□ 0.92
Ccdc180J3QNE4 AC142266.1-201ENSMUST00000228107 415 ntBASIC20.77■□□□□ 0.92
Ccdc180J3QNE4 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc180J3QNE4 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc180J3QNE4 Mir326-201ENSMUST00000083637 95 ntBASIC20.77■□□□□ 0.92
Ccdc180J3QNE4 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc180J3QNE4 AC174797.1-201ENSMUST00000224339 1649 ntBASIC20.77■□□□□ 0.92
Ccdc180J3QNE4 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC20.77■□□□□ 0.92
Ccdc180J3QNE4 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc180J3QNE4 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc180J3QNE4 Gm1995-201ENSMUST00000220838 2602 ntBASIC20.77■□□□□ 0.92
Ccdc180J3QNE4 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc180J3QNE4 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc180J3QNE4 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
Ccdc180J3QNE4 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc180J3QNE4 Gm37014-201ENSMUST00000194723 2253 ntBASIC20.77■□□□□ 0.92
Ccdc180J3QNE4 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc180J3QNE4 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC20.77■□□□□ 0.91
Ccdc180J3QNE4 Gm42499-201ENSMUST00000196193 1412 ntBASIC20.77■□□□□ 0.91
Ccdc180J3QNE4 Gm22344-201ENSMUST00000122642 278 ntBASIC20.77■□□□□ 0.91
Ccdc180J3QNE4 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC20.77■□□□□ 0.91
Ccdc180J3QNE4 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ccdc180J3QNE4 Gm9372-201ENSMUST00000168454 430 ntBASIC20.77■□□□□ 0.91
Ccdc180J3QNE4 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC20.77■□□□□ 0.91
Ccdc180J3QNE4 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Ccdc180J3QNE4 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC20.77■□□□□ 0.91
Ccdc180J3QNE4 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
Ccdc180J3QNE4 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.91
Ccdc180J3QNE4 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ccdc180J3QNE4 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Ccdc180J3QNE4 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc180J3QNE4 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
Ccdc180J3QNE4 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc180J3QNE4 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc180J3QNE4 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc180J3QNE4 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC20.76■□□□□ 0.91
Ccdc180J3QNE4 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc180J3QNE4 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc180J3QNE4 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC20.76■□□□□ 0.91
Ccdc180J3QNE4 Gm18733-202ENSMUST00000174447 401 ntBASIC20.76■□□□□ 0.91
Ccdc180J3QNE4 Gm6352-201ENSMUST00000203583 1134 ntBASIC20.76■□□□□ 0.91
Ccdc180J3QNE4 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc180J3QNE4 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC20.76■□□□□ 0.91
Ccdc180J3QNE4 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc180J3QNE4 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc180J3QNE4 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc180J3QNE4 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Ccdc180J3QNE4 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms