Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.88□□□□□ -0.67
Colca2F8VPY8 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Colca2F8VPY8 Cog3-203ENSMUST00000227473 4197 ntBASIC10.88□□□□□ -0.67
Colca2F8VPY8 Mir744-201ENSMUST00000103261 100 ntBASIC10.88□□□□□ -0.67
Colca2F8VPY8 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Colca2F8VPY8 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Colca2F8VPY8 Gm6758-201ENSMUST00000119643 1055 ntBASIC10.88□□□□□ -0.67
Colca2F8VPY8 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC10.88□□□□□ -0.67
Colca2F8VPY8 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC10.88□□□□□ -0.67
Colca2F8VPY8 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC10.88□□□□□ -0.67
Colca2F8VPY8 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC10.88□□□□□ -0.67
Colca2F8VPY8 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC10.88□□□□□ -0.67
Colca2F8VPY8 Ighv5-8-202ENSMUST00000191967 337 ntBASIC10.88□□□□□ -0.67
Colca2F8VPY8 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Colca2F8VPY8 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Colca2F8VPY8 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC10.88□□□□□ -0.67
Colca2F8VPY8 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC10.88□□□□□ -0.67
Colca2F8VPY8 AC154759.1-201ENSMUST00000224137 1159 ntBASIC10.88□□□□□ -0.67
Colca2F8VPY8 AC158986.2-201ENSMUST00000227487 618 ntBASIC10.88□□□□□ -0.67
Colca2F8VPY8 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC10.88□□□□□ -0.67
Colca2F8VPY8 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Colca2F8VPY8 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Colca2F8VPY8 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Colca2F8VPY8 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Colca2F8VPY8 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Colca2F8VPY8 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.88□□□□□ -0.67
Colca2F8VPY8 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.88□□□□□ -0.67
Colca2F8VPY8 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Colca2F8VPY8 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Colca2F8VPY8 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Colca2F8VPY8 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Colca2F8VPY8 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Colca2F8VPY8 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC10.88□□□□□ -0.67
Colca2F8VPY8 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Colca2F8VPY8 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Colca2F8VPY8 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.87□□□□□ -0.67
Colca2F8VPY8 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Colca2F8VPY8 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Colca2F8VPY8 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Colca2F8VPY8 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Colca2F8VPY8 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Colca2F8VPY8 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Colca2F8VPY8 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Colca2F8VPY8 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Colca2F8VPY8 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.87□□□□□ -0.67
Colca2F8VPY8 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Colca2F8VPY8 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Colca2F8VPY8 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Colca2F8VPY8 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Colca2F8VPY8 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.87□□□□□ -0.67
Colca2F8VPY8 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Colca2F8VPY8 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC10.87□□□□□ -0.67
Colca2F8VPY8 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC10.87□□□□□ -0.67
Colca2F8VPY8 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Colca2F8VPY8 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Colca2F8VPY8 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Colca2F8VPY8 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Colca2F8VPY8 Gm8659-201ENSMUST00000120024 1084 ntBASIC10.87□□□□□ -0.67
Colca2F8VPY8 Gm15982-201ENSMUST00000121681 554 ntBASIC10.87□□□□□ -0.67
Colca2F8VPY8 Gm16305-201ENSMUST00000140747 556 ntBASIC10.87□□□□□ -0.67
Colca2F8VPY8 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC10.87□□□□□ -0.67
Colca2F8VPY8 Gm5335-201ENSMUST00000182995 1000 ntBASIC10.87□□□□□ -0.67
Colca2F8VPY8 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Colca2F8VPY8 Gm37444-201ENSMUST00000193605 439 ntBASIC10.87□□□□□ -0.67
Colca2F8VPY8 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC10.87□□□□□ -0.67
Colca2F8VPY8 Gm6352-201ENSMUST00000203583 1134 ntBASIC10.87□□□□□ -0.67
Colca2F8VPY8 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC10.87□□□□□ -0.67
Colca2F8VPY8 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC10.87□□□□□ -0.67
Colca2F8VPY8 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Colca2F8VPY8 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC10.87□□□□□ -0.67
Colca2F8VPY8 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Colca2F8VPY8 n-R5s71-201ENSMUST00000093668 119 ntBASIC10.87□□□□□ -0.67
Colca2F8VPY8 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Colca2F8VPY8 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Colca2F8VPY8 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Colca2F8VPY8 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC10.87□□□□□ -0.67
Colca2F8VPY8 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Colca2F8VPY8 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC10.87□□□□□ -0.67
Colca2F8VPY8 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Colca2F8VPY8 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Colca2F8VPY8 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.87□□□□□ -0.67
Colca2F8VPY8 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Colca2F8VPY8 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Colca2F8VPY8 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Colca2F8VPY8 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Colca2F8VPY8 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.87□□□□□ -0.67
Colca2F8VPY8 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Colca2F8VPY8 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Colca2F8VPY8 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Colca2F8VPY8 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Colca2F8VPY8 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Colca2F8VPY8 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Colca2F8VPY8 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Colca2F8VPY8 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.86□□□□□ -0.67
Colca2F8VPY8 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Colca2F8VPY8 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Colca2F8VPY8 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Colca2F8VPY8 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Colca2F8VPY8 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Colca2F8VPY8 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms