Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atf6F6VAN0 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atf6F6VAN0 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atf6F6VAN0 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Atf6F6VAN0 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atf6F6VAN0 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atf6F6VAN0 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Atf6F6VAN0 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.86□□□□□ -0.51
Atf6F6VAN0 Gm14071-201ENSMUST00000117817 509 ntBASIC11.86□□□□□ -0.51
Atf6F6VAN0 Gm14724-201ENSMUST00000118400 537 ntBASIC11.86□□□□□ -0.51
Atf6F6VAN0 Gm11439-201ENSMUST00000118598 409 ntBASIC11.86□□□□□ -0.51
Atf6F6VAN0 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.86□□□□□ -0.51
Atf6F6VAN0 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Atf6F6VAN0 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.86□□□□□ -0.51
Atf6F6VAN0 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Atf6F6VAN0 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.86□□□□□ -0.51
Atf6F6VAN0 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Atf6F6VAN0 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atf6F6VAN0 Gm38151-201ENSMUST00000195085 289 ntBASIC11.86□□□□□ -0.51
Atf6F6VAN0 Gm2965-201ENSMUST00000198365 343 ntBASIC11.86□□□□□ -0.51
Atf6F6VAN0 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atf6F6VAN0 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atf6F6VAN0 Gm21811-201ENSMUST00000096485 930 ntBASIC11.86□□□□□ -0.51
Atf6F6VAN0 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Atf6F6VAN0 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Atf6F6VAN0 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.86□□□□□ -0.51
Atf6F6VAN0 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Atf6F6VAN0 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.86□□□□□ -0.51
Atf6F6VAN0 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Atf6F6VAN0 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Atf6F6VAN0 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atf6F6VAN0 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atf6F6VAN0 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Atf6F6VAN0 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Atf6F6VAN0 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atf6F6VAN0 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atf6F6VAN0 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atf6F6VAN0 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.86□□□□□ -0.51
Atf6F6VAN0 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Atf6F6VAN0 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atf6F6VAN0 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.86□□□□□ -0.51
Atf6F6VAN0 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atf6F6VAN0 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atf6F6VAN0 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.85□□□□□ -0.51
Atf6F6VAN0 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atf6F6VAN0 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atf6F6VAN0 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atf6F6VAN0 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atf6F6VAN0 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atf6F6VAN0 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Atf6F6VAN0 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Atf6F6VAN0 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Atf6F6VAN0 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Atf6F6VAN0 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atf6F6VAN0 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atf6F6VAN0 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atf6F6VAN0 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.85□□□□□ -0.51
Atf6F6VAN0 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atf6F6VAN0 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atf6F6VAN0 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atf6F6VAN0 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.85□□□□□ -0.51
Atf6F6VAN0 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.85□□□□□ -0.51
Atf6F6VAN0 Gm14716-201ENSMUST00000120138 718 ntBASIC11.85□□□□□ -0.51
Atf6F6VAN0 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.85□□□□□ -0.51
Atf6F6VAN0 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Atf6F6VAN0 Gm26047-201ENSMUST00000157308 113 ntBASIC11.85□□□□□ -0.51
Atf6F6VAN0 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Atf6F6VAN0 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.85□□□□□ -0.51
Atf6F6VAN0 Gm18734-201ENSMUST00000172937 808 ntBASIC11.85□□□□□ -0.51
Atf6F6VAN0 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Atf6F6VAN0 Gm16505-201ENSMUST00000179981 232 ntBASIC11.85□□□□□ -0.51
Atf6F6VAN0 Gm8100-201ENSMUST00000182906 988 ntBASIC11.85□□□□□ -0.51
Atf6F6VAN0 Gm27341-201ENSMUST00000183570 106 ntBASIC11.85□□□□□ -0.51
Atf6F6VAN0 Gm28450-201ENSMUST00000187349 638 ntBASIC11.85□□□□□ -0.51
Atf6F6VAN0 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Atf6F6VAN0 Gm26047-202ENSMUST00000198840 115 ntBASIC11.85□□□□□ -0.51
Atf6F6VAN0 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.85□□□□□ -0.51
Atf6F6VAN0 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.85□□□□□ -0.51
Atf6F6VAN0 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.85□□□□□ -0.51
Atf6F6VAN0 Gm9257-201ENSMUST00000221254 232 ntBASIC11.85□□□□□ -0.51
Atf6F6VAN0 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.85□□□□□ -0.51
Atf6F6VAN0 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atf6F6VAN0 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Atf6F6VAN0 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Atf6F6VAN0 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Atf6F6VAN0 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Atf6F6VAN0 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Atf6F6VAN0 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atf6F6VAN0 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atf6F6VAN0 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.85□□□□□ -0.51
Atf6F6VAN0 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.85□□□□□ -0.51
Atf6F6VAN0 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Atf6F6VAN0 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.85□□□□□ -0.51
Atf6F6VAN0 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atf6F6VAN0 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Atf6F6VAN0 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.85□□□□□ -0.51
Atf6F6VAN0 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Atf6F6VAN0 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Atf6F6VAN0 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Atf6F6VAN0 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms