Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Hfm1D3Z4R1 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hfm1D3Z4R1 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hfm1D3Z4R1 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Hfm1D3Z4R1 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hfm1D3Z4R1 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Hfm1D3Z4R1 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hfm1D3Z4R1 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hfm1D3Z4R1 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hfm1D3Z4R1 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hfm1D3Z4R1 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hfm1D3Z4R1 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hfm1D3Z4R1 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hfm1D3Z4R1 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Hfm1D3Z4R1 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Hfm1D3Z4R1 Ighv13-1-201ENSMUST00000103480 294 ntBASIC15.99■□□□□ 0.15
Hfm1D3Z4R1 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC15.99■□□□□ 0.15
Hfm1D3Z4R1 Gm12947-201ENSMUST00000116114 420 ntBASIC15.99■□□□□ 0.15
Hfm1D3Z4R1 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC15.99■□□□□ 0.15
Hfm1D3Z4R1 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC15.99■□□□□ 0.15
Hfm1D3Z4R1 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Hfm1D3Z4R1 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Hfm1D3Z4R1 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC15.99■□□□□ 0.15
Hfm1D3Z4R1 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC15.99■□□□□ 0.15
Hfm1D3Z4R1 Gm9353-201ENSMUST00000200472 604 ntBASIC15.99■□□□□ 0.15
Hfm1D3Z4R1 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hfm1D3Z4R1 Gm44640-201ENSMUST00000206894 247 ntBASIC15.99■□□□□ 0.15
Hfm1D3Z4R1 Gm45258-201ENSMUST00000210042 853 ntBASIC15.99■□□□□ 0.15
Hfm1D3Z4R1 CT010486.3-201ENSMUST00000224555 811 ntBASIC15.99■□□□□ 0.15
Hfm1D3Z4R1 AC187103.3-201ENSMUST00000225725 646 ntBASIC15.99■□□□□ 0.15
Hfm1D3Z4R1 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC15.99■□□□□ 0.15
Hfm1D3Z4R1 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hfm1D3Z4R1 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.99■□□□□ 0.15
Hfm1D3Z4R1 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hfm1D3Z4R1 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Hfm1D3Z4R1 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Hfm1D3Z4R1 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Hfm1D3Z4R1 AC157950.1-201ENSMUST00000217561 2168 ntBASIC15.99■□□□□ 0.15
Hfm1D3Z4R1 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hfm1D3Z4R1 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Hfm1D3Z4R1 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Hfm1D3Z4R1 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Hfm1D3Z4R1 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Hfm1D3Z4R1 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hfm1D3Z4R1 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.98■□□□□ 0.15
Hfm1D3Z4R1 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Hfm1D3Z4R1 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hfm1D3Z4R1 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Hfm1D3Z4R1 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Hfm1D3Z4R1 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hfm1D3Z4R1 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hfm1D3Z4R1 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hfm1D3Z4R1 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hfm1D3Z4R1 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Hfm1D3Z4R1 Gm44573-201ENSMUST00000191753 2370 ntBASIC15.98■□□□□ 0.15
Hfm1D3Z4R1 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Hfm1D3Z4R1 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC15.98■□□□□ 0.15
Hfm1D3Z4R1 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC15.98■□□□□ 0.15
Hfm1D3Z4R1 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC15.98■□□□□ 0.15
Hfm1D3Z4R1 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Hfm1D3Z4R1 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Hfm1D3Z4R1 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hfm1D3Z4R1 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Hfm1D3Z4R1 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Hfm1D3Z4R1 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC15.98■□□□□ 0.15
Hfm1D3Z4R1 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC15.98■□□□□ 0.15
Hfm1D3Z4R1 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Hfm1D3Z4R1 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hfm1D3Z4R1 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hfm1D3Z4R1 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC15.98■□□□□ 0.15
Hfm1D3Z4R1 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hfm1D3Z4R1 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Hfm1D3Z4R1 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hfm1D3Z4R1 Gm15746-201ENSMUST00000120684 1027 ntBASIC15.97■□□□□ 0.15
Hfm1D3Z4R1 Gm6441-201ENSMUST00000120983 696 ntBASIC15.97■□□□□ 0.15
Hfm1D3Z4R1 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Hfm1D3Z4R1 Gm5808-201ENSMUST00000178090 357 ntBASIC15.97■□□□□ 0.15
Hfm1D3Z4R1 Gm7928-201ENSMUST00000181249 701 ntBASIC15.97■□□□□ 0.15
Hfm1D3Z4R1 Gm27316-201ENSMUST00000184884 277 ntBASIC15.97■□□□□ 0.15
Hfm1D3Z4R1 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC15.97■□□□□ 0.15
Hfm1D3Z4R1 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Hfm1D3Z4R1 AC166361.2-201ENSMUST00000219269 1415 ntBASIC15.97■□□□□ 0.15
Hfm1D3Z4R1 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Hfm1D3Z4R1 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hfm1D3Z4R1 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hfm1D3Z4R1 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC15.97■□□□□ 0.15
Hfm1D3Z4R1 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hfm1D3Z4R1 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Hfm1D3Z4R1 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hfm1D3Z4R1 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hfm1D3Z4R1 Gm43760-201ENSMUST00000202120 3015 ntBASIC15.97■□□□□ 0.15
Hfm1D3Z4R1 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hfm1D3Z4R1 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hfm1D3Z4R1 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hfm1D3Z4R1 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Hfm1D3Z4R1 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Hfm1D3Z4R1 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Hfm1D3Z4R1 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hfm1D3Z4R1 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hfm1D3Z4R1 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms