Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Gm15172-201ENSMUST00000118945 1046 ntBASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Mup-ps26-201ENSMUST00000121751 202 ntBASIC9.68□□□□□ -0.86
Usf3B2RUQ2 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 AC156501.1-201ENSMUST00000228219 270 ntBASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Mbnl2-204ENSMUST00000227012 2390 ntBASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Usf3B2RUQ2 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Usf3B2RUQ2 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Usf3B2RUQ2 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Gm43184-201ENSMUST00000197247 542 ntBASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC9.67□□□□□ -0.86
Usf3B2RUQ2 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC9.67□□□□□ -0.86
Usf3B2RUQ2 AC153505.1-201ENSMUST00000218819 1071 ntBASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Gm26448-201ENSMUST00000082446 203 ntBASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC9.67□□□□□ -0.86
Usf3B2RUQ2 AC154671.1-201ENSMUST00000228617 1578 ntBASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Gm23596-201ENSMUST00000104304 132 ntBASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Gm43778-201ENSMUST00000199438 199 ntBASIC9.67□□□□□ -0.86
Usf3B2RUQ2 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Gm19091-201ENSMUST00000208120 978 ntBASIC9.67□□□□□ -0.86
Usf3B2RUQ2 AC159376.1-201ENSMUST00000218504 630 ntBASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Gm9785-201ENSMUST00000062642 1006 ntBASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Gm8522-201ENSMUST00000118416 1929 ntBASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Usf3B2RUQ2 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Gm42941-201ENSMUST00000200347 1321 ntBASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Usf3B2RUQ2 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Usf3B2RUQ2 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Usf3B2RUQ2 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC9.66□□□□□ -0.86
Usf3B2RUQ2 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Usf3B2RUQ2 Gm11470-201ENSMUST00000118868 1475 ntBASIC9.66□□□□□ -0.86
Usf3B2RUQ2 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Usf3B2RUQ2 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Usf3B2RUQ2 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Usf3B2RUQ2 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Usf3B2RUQ2 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
Usf3B2RUQ2 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Usf3B2RUQ2 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Usf3B2RUQ2 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Usf3B2RUQ2 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Usf3B2RUQ2 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC9.66□□□□□ -0.86
Usf3B2RUQ2 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC9.66□□□□□ -0.86
Usf3B2RUQ2 Gm28686-201ENSMUST00000187404 609 ntBASIC9.66□□□□□ -0.86
Usf3B2RUQ2 Gm2965-201ENSMUST00000198365 343 ntBASIC9.66□□□□□ -0.86
Usf3B2RUQ2 Gm17831-201ENSMUST00000205579 900 ntBASIC9.66□□□□□ -0.86
Usf3B2RUQ2 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Usf3B2RUQ2 AC122408.1-201ENSMUST00000218949 218 ntBASIC9.66□□□□□ -0.86
Usf3B2RUQ2 Gm4797-201ENSMUST00000219075 1283 ntBASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms