Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col4a6B1AVK5 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col4a6B1AVK5 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Col4a6B1AVK5 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col4a6B1AVK5 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col4a6B1AVK5 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col4a6B1AVK5 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col4a6B1AVK5 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col4a6B1AVK5 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col4a6B1AVK5 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col4a6B1AVK5 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Col4a6B1AVK5 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC11.66□□□□□ -0.54
Col4a6B1AVK5 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col4a6B1AVK5 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Col4a6B1AVK5 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col4a6B1AVK5 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col4a6B1AVK5 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC11.66□□□□□ -0.54
Col4a6B1AVK5 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC11.66□□□□□ -0.54
Col4a6B1AVK5 CT030195.2-201ENSMUST00000226074 1286 ntBASIC11.66□□□□□ -0.54
Col4a6B1AVK5 Nsmce2-203ENSMUST00000227173 1122 ntBASIC11.66□□□□□ -0.54
Col4a6B1AVK5 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col4a6B1AVK5 Gm6478-201ENSMUST00000099450 742 ntBASIC11.66□□□□□ -0.54
Col4a6B1AVK5 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col4a6B1AVK5 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col4a6B1AVK5 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col4a6B1AVK5 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC11.66□□□□□ -0.54
Col4a6B1AVK5 AC154354.1-203ENSMUST00000225565 1364 ntBASIC11.66□□□□□ -0.54
Col4a6B1AVK5 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col4a6B1AVK5 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Col4a6B1AVK5 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Col4a6B1AVK5 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col4a6B1AVK5 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col4a6B1AVK5 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col4a6B1AVK5 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col4a6B1AVK5 Gm37160-201ENSMUST00000193081 1689 ntBASIC11.66□□□□□ -0.54
Col4a6B1AVK5 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col4a6B1AVK5 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col4a6B1AVK5 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col4a6B1AVK5 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col4a6B1AVK5 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col4a6B1AVK5 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col4a6B1AVK5 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Col4a6B1AVK5 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col4a6B1AVK5 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.54
Col4a6B1AVK5 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Col4a6B1AVK5 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.54
Col4a6B1AVK5 Gm24933-201ENSMUST00000103762 110 ntBASIC11.65□□□□□ -0.54
Col4a6B1AVK5 Gm23252-201ENSMUST00000103776 110 ntBASIC11.65□□□□□ -0.54
Col4a6B1AVK5 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col4a6B1AVK5 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Col4a6B1AVK5 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Col4a6B1AVK5 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Col4a6B1AVK5 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC11.65□□□□□ -0.54
Col4a6B1AVK5 Gm25288-201ENSMUST00000122800 265 ntBASIC11.65□□□□□ -0.54
Col4a6B1AVK5 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC11.65□□□□□ -0.54
Col4a6B1AVK5 Gm24294-201ENSMUST00000158295 277 ntBASIC11.65□□□□□ -0.54
Col4a6B1AVK5 n-R5s130-201ENSMUST00000178128 119 ntBASIC11.65□□□□□ -0.54
Col4a6B1AVK5 Gm24312-201ENSMUST00000178677 119 ntBASIC11.65□□□□□ -0.54
Col4a6B1AVK5 n-R5s106-201ENSMUST00000179060 119 ntBASIC11.65□□□□□ -0.54
Col4a6B1AVK5 Gm26443-201ENSMUST00000179610 110 ntBASIC11.65□□□□□ -0.54
Col4a6B1AVK5 n-R5s118-201ENSMUST00000179887 119 ntBASIC11.65□□□□□ -0.54
Col4a6B1AVK5 Gm5335-201ENSMUST00000182995 1000 ntBASIC11.65□□□□□ -0.54
Col4a6B1AVK5 Mir6953-201ENSMUST00000184745 68 ntBASIC11.65□□□□□ -0.54
Col4a6B1AVK5 Gm29304-201ENSMUST00000186555 695 ntBASIC11.65□□□□□ -0.54
Col4a6B1AVK5 Gm29223-201ENSMUST00000188867 695 ntBASIC11.65□□□□□ -0.54
Col4a6B1AVK5 Platr10-202ENSMUST00000191479 818 ntBASIC11.65□□□□□ -0.54
Col4a6B1AVK5 Gm37921-201ENSMUST00000194333 695 ntBASIC11.65□□□□□ -0.54
Col4a6B1AVK5 Gm18123-201ENSMUST00000210874 822 ntBASIC11.65□□□□□ -0.54
Col4a6B1AVK5 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC11.65□□□□□ -0.54
Col4a6B1AVK5 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.54
Col4a6B1AVK5 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col4a6B1AVK5 Gm10020-201ENSMUST00000081993 612 ntBASIC11.65□□□□□ -0.54
Col4a6B1AVK5 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC11.65□□□□□ -0.54
Col4a6B1AVK5 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col4a6B1AVK5 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col4a6B1AVK5 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col4a6B1AVK5 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col4a6B1AVK5 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col4a6B1AVK5 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Col4a6B1AVK5 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col4a6B1AVK5 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Col4a6B1AVK5 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Col4a6B1AVK5 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.65□□□□□ -0.54
Col4a6B1AVK5 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC11.65□□□□□ -0.54
Col4a6B1AVK5 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col4a6B1AVK5 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col4a6B1AVK5 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col4a6B1AVK5 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col4a6B1AVK5 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col4a6B1AVK5 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.65□□□□□ -0.54
Col4a6B1AVK5 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col4a6B1AVK5 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Col4a6B1AVK5 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Col4a6B1AVK5 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Col4a6B1AVK5 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.55
Col4a6B1AVK5 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Col4a6B1AVK5 Gm11919-201ENSMUST00000117609 721 ntBASIC11.65□□□□□ -0.55
Col4a6B1AVK5 Gm6441-201ENSMUST00000120983 696 ntBASIC11.65□□□□□ -0.55
Col4a6B1AVK5 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Col4a6B1AVK5 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms