Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Chd3B1AR17 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chd3B1AR17 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Chd3B1AR17 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chd3B1AR17 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.3□□□□□ -0.6
Chd3B1AR17 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.3□□□□□ -0.6
Chd3B1AR17 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Chd3B1AR17 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC11.3□□□□□ -0.6
Chd3B1AR17 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chd3B1AR17 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chd3B1AR17 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chd3B1AR17 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chd3B1AR17 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Chd3B1AR17 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chd3B1AR17 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.3□□□□□ -0.6
Chd3B1AR17 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chd3B1AR17 Gm3828-201ENSMUST00000121817 257 ntBASIC11.3□□□□□ -0.6
Chd3B1AR17 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.3□□□□□ -0.6
Chd3B1AR17 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.3□□□□□ -0.6
Chd3B1AR17 Gm44323-201ENSMUST00000198689 129 ntBASIC11.3□□□□□ -0.6
Chd3B1AR17 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Chd3B1AR17 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.3□□□□□ -0.6
Chd3B1AR17 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC11.3□□□□□ -0.6
Chd3B1AR17 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Chd3B1AR17 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chd3B1AR17 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chd3B1AR17 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chd3B1AR17 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.3□□□□□ -0.6
Chd3B1AR17 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Chd3B1AR17 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Chd3B1AR17 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Chd3B1AR17 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chd3B1AR17 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chd3B1AR17 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chd3B1AR17 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd3B1AR17 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd3B1AR17 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Chd3B1AR17 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd3B1AR17 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Chd3B1AR17 Gm39288-201ENSMUST00000210554 446 ntBASIC11.29□□□□□ -0.6
Chd3B1AR17 CT025553.1-201ENSMUST00000226292 299 ntBASIC11.29□□□□□ -0.6
Chd3B1AR17 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd3B1AR17 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd3B1AR17 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Chd3B1AR17 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd3B1AR17 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Chd3B1AR17 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd3B1AR17 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Chd3B1AR17 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.29□□□□□ -0.6
Chd3B1AR17 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd3B1AR17 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Chd3B1AR17 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd3B1AR17 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Chd3B1AR17 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.29□□□□□ -0.6
Chd3B1AR17 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd3B1AR17 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd3B1AR17 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Chd3B1AR17 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd3B1AR17 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Chd3B1AR17 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Chd3B1AR17 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd3B1AR17 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd3B1AR17 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd3B1AR17 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd3B1AR17 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd3B1AR17 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Chd3B1AR17 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Chd3B1AR17 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Chd3B1AR17 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Chd3B1AR17 Gm24992-201ENSMUST00000157412 130 ntBASIC11.29□□□□□ -0.6
Chd3B1AR17 Gm23218-201ENSMUST00000158124 276 ntBASIC11.29□□□□□ -0.6
Chd3B1AR17 Gm23694-201ENSMUST00000179335 110 ntBASIC11.29□□□□□ -0.6
Chd3B1AR17 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.29□□□□□ -0.6
Chd3B1AR17 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.29□□□□□ -0.6
Chd3B1AR17 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.29□□□□□ -0.6
Chd3B1AR17 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC11.29□□□□□ -0.6
Chd3B1AR17 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.29□□□□□ -0.6
Chd3B1AR17 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd3B1AR17 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd3B1AR17 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd3B1AR17 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.29□□□□□ -0.6
Chd3B1AR17 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd3B1AR17 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Chd3B1AR17 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.29□□□□□ -0.6
Chd3B1AR17 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Chd3B1AR17 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Chd3B1AR17 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.29□□□□□ -0.6
Chd3B1AR17 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd3B1AR17 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd3B1AR17 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd3B1AR17 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.28□□□□□ -0.6
Chd3B1AR17 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC11.28□□□□□ -0.6
Chd3B1AR17 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd3B1AR17 Gm15617-201ENSMUST00000118973 771 ntBASIC11.28□□□□□ -0.6
Chd3B1AR17 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd3B1AR17 Gm12516-201ENSMUST00000120819 385 ntBASIC11.28□□□□□ -0.6
Chd3B1AR17 Gm9089-201ENSMUST00000122027 526 ntBASIC11.28□□□□□ -0.6
Chd3B1AR17 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.28□□□□□ -0.6
Chd3B1AR17 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd3B1AR17 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms