Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm21824-201ENSMUST00000186810 696 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm21862-201ENSMUST00000186957 696 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm21796-201ENSMUST00000187116 696 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm21795-201ENSMUST00000187263 696 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm28814-201ENSMUST00000187334 696 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm21720-201ENSMUST00000187428 696 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm20827-201ENSMUST00000187928 696 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm21766-201ENSMUST00000187962 696 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm21837-201ENSMUST00000188117 696 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm21829-201ENSMUST00000188787 696 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm21892-201ENSMUST00000189182 696 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm21777-201ENSMUST00000189307 696 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm28247-201ENSMUST00000189329 696 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm28350-201ENSMUST00000189453 696 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm21906-201ENSMUST00000189760 696 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm29411-201ENSMUST00000189889 696 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm21717-201ENSMUST00000189902 696 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm21765-201ENSMUST00000189913 696 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm21895-201ENSMUST00000189997 696 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm21734-201ENSMUST00000190346 696 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm21902-201ENSMUST00000190361 696 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm29029-201ENSMUST00000190520 696 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm21898-201ENSMUST00000190727 696 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm29300-201ENSMUST00000190738 696 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm20793-201ENSMUST00000190779 696 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm28879-201ENSMUST00000190973 696 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm21752-201ENSMUST00000191023 696 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm28841-201ENSMUST00000191284 695 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm21813-201ENSMUST00000191291 696 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm21878-201ENSMUST00000191365 696 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm21855-201ENSMUST00000191596 696 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm20833-201ENSMUST00000192708 696 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm21907-201ENSMUST00000192989 696 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm20928-201ENSMUST00000192992 696 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm20851-201ENSMUST00000193038 696 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm37476-201ENSMUST00000193046 696 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm21678-201ENSMUST00000193567 696 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm21768-201ENSMUST00000194103 696 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm20836-201ENSMUST00000194582 696 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm21660-201ENSMUST00000195789 696 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm43761-201ENSMUST00000202132 991 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC9.29□□□□□ -0.92
Chd6A3KFM7 4933439N14Rik-201ENSMUST00000211062 1087 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Chd6A3KFM7 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Chd6A3KFM7 AC134860.2-201ENSMUST00000225277 1036 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Chd6A3KFM7 Pla2g2a-201ENSMUST00000077582 784 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Chd6A3KFM7 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Chd6A3KFM7 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Chd6A3KFM7 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Chd6A3KFM7 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Chd6A3KFM7 Ntrk2-209ENSMUST00000225950 2640 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Chd6A3KFM7 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Chd6A3KFM7 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Chd6A3KFM7 Gm14997-201ENSMUST00000119232 636 ntBASIC9.28□□□□□ -0.92
Chd6A3KFM7 Gm14153-201ENSMUST00000119923 1139 ntBASIC9.28□□□□□ -0.92
Chd6A3KFM7 Gm13543-201ENSMUST00000121230 796 ntBASIC9.28□□□□□ -0.92
Chd6A3KFM7 Tnni1-208ENSMUST00000154463 749 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Chd6A3KFM7 Ing5-203ENSMUST00000190476 918 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Chd6A3KFM7 Gm42402-201ENSMUST00000208341 1054 ntBASIC9.28□□□□□ -0.92
Chd6A3KFM7 Gm5996-201ENSMUST00000211110 718 ntBASIC9.28□□□□□ -0.92
Chd6A3KFM7 Gm3926-201ENSMUST00000223378 1123 ntBASIC9.28□□□□□ -0.92
Chd6A3KFM7 AC125223.1-201ENSMUST00000224004 749 ntBASIC9.28□□□□□ -0.92
Chd6A3KFM7 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Chd6A3KFM7 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC9.28□□□□□ -0.92
Chd6A3KFM7 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC9.28□□□□□ -0.92
Chd6A3KFM7 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Chd6A3KFM7 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC9.28□□□□□ -0.92
Chd6A3KFM7 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Chd6A3KFM7 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Chd6A3KFM7 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Chd6A3KFM7 AC129931.1-201ENSMUST00000228865 1861 ntBASIC9.28□□□□□ -0.92
Chd6A3KFM7 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Chd6A3KFM7 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Chd6A3KFM7 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Chd6A3KFM7 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Chd6A3KFM7 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Chd6A3KFM7 Gm37324-201ENSMUST00000194500 4504 ntBASIC9.28□□□□□ -0.92
Chd6A3KFM7 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
Chd6A3KFM7 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC9.28□□□□□ -0.92
Chd6A3KFM7 1700028P15Rik-203ENSMUST00000151904 519 ntTSL 3 BASIC9.28□□□□□ -0.92
Chd6A3KFM7 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC9.28□□□□□ -0.92
Chd6A3KFM7 Gm23479-201ENSMUST00000158876 122 ntBASIC9.28□□□□□ -0.92
Chd6A3KFM7 1700028K03Rik-202ENSMUST00000159902 742 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Chd6A3KFM7 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC9.28□□□□□ -0.92
Chd6A3KFM7 Gm20281-201ENSMUST00000188225 267 ntBASIC9.28□□□□□ -0.92
Chd6A3KFM7 Gm19412-202ENSMUST00000189156 569 ntTSL 3 BASIC9.28□□□□□ -0.92
Chd6A3KFM7 Gm31374-201ENSMUST00000213885 619 ntTSL 5 BASIC9.28□□□□□ -0.92
Chd6A3KFM7 AC102327.1-201ENSMUST00000226389 742 ntBASIC9.28□□□□□ -0.92
Chd6A3KFM7 Scgb3a1-201ENSMUST00000043873 493 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Chd6A3KFM7 BC048562-201ENSMUST00000057265 690 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Chd6A3KFM7 Scgb3a1-202ENSMUST00000076006 598 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Chd6A3KFM7 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Chd6A3KFM7 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC9.28□□□□□ -0.92
Chd6A3KFM7 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Chd6A3KFM7 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms