Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Mfn2-204ENSMUST00000105716 4241 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Cacna1c-214ENSMUST00000188106 6462 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 D630003M21Rik-202ENSMUST00000103121 4521 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Snord83b-201ENSMUST00000104546 94 ntBASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Gm12859-201ENSMUST00000117834 427 ntBASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Gm8213-201ENSMUST00000118191 441 ntBASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Gm13612-201ENSMUST00000119276 390 ntBASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Gm9124-201ENSMUST00000191789 1092 ntBASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Gm9113-201ENSMUST00000192510 1018 ntBASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Gm9131-201ENSMUST00000193557 1089 ntBASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Gm9121-201ENSMUST00000193749 1071 ntBASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 AC167013.1-201ENSMUST00000228592 202 ntBASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Pex7-201ENSMUST00000020182 8099 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Txlng-204ENSMUST00000112316 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Oas3-201ENSMUST00000044833 4720 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 AC158779.1-201ENSMUST00000228912 3861 ntBASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC8.23□□□□□ -1.09
Trav8-1A0A075B641 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Spata31d1a-201ENSMUST00000066510 4261 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Gtf2i-222ENSMUST00000174354 4084 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Plxnb3-201ENSMUST00000002079 6030 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Gm37031-201ENSMUST00000195487 2530 ntBASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Mir692-1-201ENSMUST00000102263 109 ntBASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Gm23119-201ENSMUST00000158610 140 ntBASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Gm10254-201ENSMUST00000052888 867 ntBASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms