Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
ClcnkaQ9WUB7 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
ClcnkaQ9WUB7 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
ClcnkaQ9WUB7 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
ClcnkaQ9WUB7 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.69□□□□□ -0.7
ClcnkaQ9WUB7 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
ClcnkaQ9WUB7 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
ClcnkaQ9WUB7 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
ClcnkaQ9WUB7 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
ClcnkaQ9WUB7 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
ClcnkaQ9WUB7 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
ClcnkaQ9WUB7 Gm11700-201ENSMUST00000119409 403 ntBASIC10.69□□□□□ -0.7
ClcnkaQ9WUB7 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
ClcnkaQ9WUB7 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
ClcnkaQ9WUB7 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
ClcnkaQ9WUB7 Gm18056-201ENSMUST00000207670 568 ntBASIC10.69□□□□□ -0.7
ClcnkaQ9WUB7 Gm18061-201ENSMUST00000208350 562 ntBASIC10.69□□□□□ -0.7
ClcnkaQ9WUB7 Gm18063-201ENSMUST00000208529 568 ntBASIC10.69□□□□□ -0.7
ClcnkaQ9WUB7 Gm18052-201ENSMUST00000208750 559 ntBASIC10.69□□□□□ -0.7
ClcnkaQ9WUB7 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC10.69□□□□□ -0.7
ClcnkaQ9WUB7 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
ClcnkaQ9WUB7 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
ClcnkaQ9WUB7 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
ClcnkaQ9WUB7 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC10.69□□□□□ -0.7
ClcnkaQ9WUB7 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
ClcnkaQ9WUB7 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.69□□□□□ -0.7
ClcnkaQ9WUB7 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC10.69□□□□□ -0.7
ClcnkaQ9WUB7 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
ClcnkaQ9WUB7 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.69□□□□□ -0.7
ClcnkaQ9WUB7 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
ClcnkaQ9WUB7 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
ClcnkaQ9WUB7 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
ClcnkaQ9WUB7 AC169511.2-201ENSMUST00000226674 2063 ntBASIC10.69□□□□□ -0.7
ClcnkaQ9WUB7 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
ClcnkaQ9WUB7 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
ClcnkaQ9WUB7 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 Gm12857-201ENSMUST00000117678 592 ntBASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 Gm11439-201ENSMUST00000118598 409 ntBASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 Gm6039-201ENSMUST00000121667 1250 ntBASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 Gm27341-201ENSMUST00000183570 106 ntBASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 Rps4l-202ENSMUST00000204242 789 ntBASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
ClcnkaQ9WUB7 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Gm13812-201ENSMUST00000118061 1347 ntBASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Gm13810-201ENSMUST00000118584 1347 ntBASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms