Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.78□□□□□ -0.36
Prpf40aQ9R1C7 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.78□□□□□ -0.36
Prpf40aQ9R1C7 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf40aQ9R1C7 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf40aQ9R1C7 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf40aQ9R1C7 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf40aQ9R1C7 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.78□□□□□ -0.36
Prpf40aQ9R1C7 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Prpf40aQ9R1C7 Gm37785-201ENSMUST00000195783 2408 ntBASIC12.78□□□□□ -0.36
Prpf40aQ9R1C7 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Prpf40aQ9R1C7 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf40aQ9R1C7 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf40aQ9R1C7 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Prpf40aQ9R1C7 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.78□□□□□ -0.36
Prpf40aQ9R1C7 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf40aQ9R1C7 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf40aQ9R1C7 Gm14724-201ENSMUST00000118400 537 ntBASIC12.78□□□□□ -0.36
Prpf40aQ9R1C7 Gm12196-201ENSMUST00000120954 262 ntBASIC12.78□□□□□ -0.36
Prpf40aQ9R1C7 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.78□□□□□ -0.36
Prpf40aQ9R1C7 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.78□□□□□ -0.36
Prpf40aQ9R1C7 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.78□□□□□ -0.36
Prpf40aQ9R1C7 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.78□□□□□ -0.36
Prpf40aQ9R1C7 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.78□□□□□ -0.36
Prpf40aQ9R1C7 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.78□□□□□ -0.36
Prpf40aQ9R1C7 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf40aQ9R1C7 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Prpf40aQ9R1C7 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf40aQ9R1C7 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Prpf40aQ9R1C7 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf40aQ9R1C7 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf40aQ9R1C7 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf40aQ9R1C7 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.78□□□□□ -0.36
Prpf40aQ9R1C7 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf40aQ9R1C7 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf40aQ9R1C7 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Prpf40aQ9R1C7 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf40aQ9R1C7 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf40aQ9R1C7 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf40aQ9R1C7 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Prpf40aQ9R1C7 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Prpf40aQ9R1C7 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Prpf40aQ9R1C7 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Prpf40aQ9R1C7 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Prpf40aQ9R1C7 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Prpf40aQ9R1C7 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Prpf40aQ9R1C7 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Prpf40aQ9R1C7 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Prpf40aQ9R1C7 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Prpf40aQ9R1C7 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Prpf40aQ9R1C7 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Prpf40aQ9R1C7 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Prpf40aQ9R1C7 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.77□□□□□ -0.37
Prpf40aQ9R1C7 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Prpf40aQ9R1C7 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Prpf40aQ9R1C7 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Prpf40aQ9R1C7 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Prpf40aQ9R1C7 Gm7857-201ENSMUST00000117957 358 ntBASIC12.77□□□□□ -0.37
Prpf40aQ9R1C7 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Prpf40aQ9R1C7 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.77□□□□□ -0.37
Prpf40aQ9R1C7 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.77□□□□□ -0.37
Prpf40aQ9R1C7 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.77□□□□□ -0.37
Prpf40aQ9R1C7 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.77□□□□□ -0.37
Prpf40aQ9R1C7 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Prpf40aQ9R1C7 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Prpf40aQ9R1C7 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Prpf40aQ9R1C7 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Prpf40aQ9R1C7 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Prpf40aQ9R1C7 Gm28450-201ENSMUST00000187349 638 ntBASIC12.77□□□□□ -0.37
Prpf40aQ9R1C7 Gm2965-201ENSMUST00000198365 343 ntBASIC12.77□□□□□ -0.37
Prpf40aQ9R1C7 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Prpf40aQ9R1C7 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.77□□□□□ -0.37
Prpf40aQ9R1C7 Gm19208-201ENSMUST00000213861 912 ntBASIC12.77□□□□□ -0.37
Prpf40aQ9R1C7 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.77□□□□□ -0.37
Prpf40aQ9R1C7 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prpf40aQ9R1C7 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prpf40aQ9R1C7 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prpf40aQ9R1C7 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prpf40aQ9R1C7 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms