Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sec61a2Q9JLR1 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Sec61a2Q9JLR1 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sec61a2Q9JLR1 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sec61a2Q9JLR1 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.45□□□□□ -0.74
Sec61a2Q9JLR1 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.45□□□□□ -0.74
Sec61a2Q9JLR1 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 AC113441.2-201ENSMUST00000221538 1468 ntBASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Gm43760-201ENSMUST00000202120 3015 ntBASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Gm12380-201ENSMUST00000119012 544 ntBASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Gm11660-201ENSMUST00000120955 412 ntBASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Gm5616-201ENSMUST00000165252 384 ntBASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Gm8741-201ENSMUST00000174736 384 ntBASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Gm28450-201ENSMUST00000187349 638 ntBASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Ighv4-2-201ENSMUST00000192975 362 ntBASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Gm5363-201ENSMUST00000211927 938 ntBASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Gm38376-201ENSMUST00000195493 2253 ntBASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a2Q9JLR1 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Gm40377-201ENSMUST00000204604 2015 ntBASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Gm5525-201ENSMUST00000190438 1312 ntBASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Gm17230-201ENSMUST00000171194 3942 ntBASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Gm23200-201ENSMUST00000104379 132 ntBASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Gm37466-201ENSMUST00000195692 652 ntBASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Gm17827-201ENSMUST00000211825 742 ntBASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Gm2553-201ENSMUST00000215986 605 ntBASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms